Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 MIR1305-201ENST00000408300 86 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 RNU2-28P-201ENST00000410457 189 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 VDAC1P9-201ENST00000412766 841 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP4O75379 C1DP2-201ENST00000418167 426 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.67□□□□□ -1.5
VAMP4O75379 RPS29P17-201ENST00000430795 166 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.67□□□□□ -1.5
VAMP4O75379 MTND6P18-201ENST00000439477 513 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 ACTR3P2-201ENST00000439585 1257 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.67□□□□□ -1.5
VAMP4O75379 NFU1P2-201ENST00000448700 469 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 HMGN3P1-201ENST00000453847 193 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 RPL21P6-201ENST00000479171 504 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AC041039.1-201ENST00000485656 536 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.67□□□□□ -1.5
VAMP4O75379 AC093824.1-201ENST00000508796 343 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 IGLVIV-65-201ENST00000517313 360 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AC090151.1-201ENST00000520784 730 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 OR5AQ1P-201ENST00000527596 927 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.67□□□□□ -1.5
VAMP4O75379 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.67□□□□□ -1.5
VAMP4O75379 AL389895.1-201ENST00000554127 252 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.67□□□□□ -1.5
VAMP4O75379 ATP5J2P6-201ENST00000565203 266 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP4O75379 BNIP3P23-201ENST00000599655 511 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AC010200.2-201ENST00000605098 235 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AL008729.2-201ENST00000606393 473 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
VAMP4O75379 AC009704.2-201ENST00000618739 483 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AC116563.2-201ENST00000624751 535 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 MIR6863-201ENST00000636112 90 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 LRRC77P-213ENST00000637727 880 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP4O75379 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP4O75379 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAMP4O75379 NOL8P1-201ENST00000508336 3529 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.67□□□□□ -1.5
VAMP4O75379 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VAMP4O75379 AC104118.1-201ENST00000607625 1589 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 AC117529.2-201ENST00000512159 2068 ntBASIC5.67□□□□□ -1.5
VAMP4O75379 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP4O75379 OR4A15-201ENST00000314706 1035 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 Y_RNA.11-201ENST00000362375 109 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 MTCO3P40-201ENST00000392516 676 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 SNORA11F-201ENST00000408237 128 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 RN7SKP266-201ENST00000410232 287 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 RN7SKP247-201ENST00000411094 308 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC048351.1-201ENST00000420064 602 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AL513174.1-201ENST00000423182 629 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP4O75379 RPL12P34-201ENST00000424532 479 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP4O75379 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP4O75379 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP4O75379 USP12PX-201ENST00000432383 1057 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 SNRPEP7-201ENST00000438350 220 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 MTND4LP16-201ENST00000440828 295 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP4O75379 AL590365.1-201ENST00000450788 243 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC009220.1-201ENST00000451614 275 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 RPS15AP1-201ENST00000457423 391 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 RN7SL98P-201ENST00000462271 300 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC011276.1-201ENST00000469688 323 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.66□□□□□ -1.5
VAMP4O75379 ACTR3P3-201ENST00000480448 893 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 DEFB109F-201ENST00000491870 277 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC106872.3-201ENST00000495104 446 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC019235.1-201ENST00000503847 207 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC114981.1-201ENST00000503897 678 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP4O75379 RNU6-150P-201ENST00000516237 95 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP4O75379 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.66□□□□□ -1.5
VAMP4O75379 OR5AP1P-201ENST00000529730 940 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 OR4A12P-201ENST00000530847 918 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.66□□□□□ -1.5
VAMP4O75379 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.66□□□□□ -1.5
VAMP4O75379 MIR4277-201ENST00000578298 84 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AP001180.3-201ENST00000582221 145 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 MIR544B-201ENST00000582372 78 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.66□□□□□ -1.5
VAMP4O75379 AC063943.3-201ENST00000615562 356 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AL359880.1-201ENST00000621879 266 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.66□□□□□ -1.5
VAMP4O75379 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
VAMP4O75379 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP4O75379 Z95331.1-201ENST00000623075 23112 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 AC134882.1-201ENST00000603738 1676 ntBASIC5.66□□□□□ -1.5
VAMP4O75379 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAMP4O75379 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
VAMP4O75379 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.65□□□□□ -1.5
VAMP4O75379 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VAMP4O75379 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
VAMP4O75379 FARSBP1-201ENST00000435808 1778 ntBASIC5.65□□□□□ -1.5
VAMP4O75379 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.65□□□□□ -1.5
VAMP4O75379 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
VAMP4O75379 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
VAMP4O75379 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms