Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
VPS4BO75351 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4BO75351 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4BO75351 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
VPS4BO75351 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS4BO75351 OR4G2P-201ENST00000328113 903 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS4BO75351 RNU1-20P-201ENST00000363314 162 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 RNU6-1243P-201ENST00000364028 107 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4BO75351 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4BO75351 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS4BO75351 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4BO75351 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4BO75351 AL024474.1-201ENST00000404655 591 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS4BO75351 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4BO75351 EIF4A1P3-201ENST00000411521 244 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 OR8G2P-201ENST00000412796 908 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS4BO75351 AC099654.2-201ENST00000433031 1980 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4BO75351 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS4BO75351 AL022578.1-201ENST00000439330 1433 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS4BO75351 NANOGNBP1-201ENST00000448444 480 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 AC104073.1-201ENST00000451988 151 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 OR6K1P-201ENST00000456766 971 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 snoU13.7-201ENST00000459220 104 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 snoU109.1-201ENST00000459339 135 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS4BO75351 AC025164.1-201ENST00000496249 478 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS4BO75351 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4BO75351 AC024589.1-201ENST00000512207 263 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 RNU1-6P-201ENST00000516290 144 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 RNA5SP360-201ENST00000516555 118 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 OR5M7P-201ENST00000526140 972 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 MED28P5-201ENST00000528254 438 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 AC105233.3-201ENST00000531125 744 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS4BO75351 PDCD5P1-201ENST00000543528 309 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS4BO75351 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS4BO75351 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS4BO75351 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS4BO75351 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS4BO75351 AC015912.2-201ENST00000571053 181 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS4BO75351 BNIP3P22-201ENST00000593399 556 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS4BO75351 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS4BO75351 AC112191.3-201ENST00000604371 277 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 AL590392.1-201ENST00000604960 446 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 AC091834.1-201ENST00000614543 472 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS4BO75351 SAMMSON-226ENST00000642089 1582 ntBASIC4.59□□□□□ -1.67
VPS4BO75351 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS4BO75351 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.59□□□□□ -1.68
VPS4BO75351 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
VPS4BO75351 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.59□□□□□ -1.68
VPS4BO75351 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.59□□□□□ -1.68
VPS4BO75351 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS4BO75351 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS4BO75351 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS4BO75351 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS4BO75351 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS4BO75351 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS4BO75351 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS4BO75351 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS4BO75351 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS4BO75351 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS4BO75351 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS4BO75351 OR11H5P-202ENST00000641612 1325 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
VPS4BO75351 Y_RNA.126-201ENST00000363382 111 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 RNA5SP479-201ENST00000364858 117 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 RNU5A-6P-201ENST00000384136 116 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 RNU6-1226P-201ENST00000384317 107 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 Y_RNA.608-201ENST00000410647 95 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS4BO75351 Z74021.1-201ENST00000423610 407 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 AL359265.2-201ENST00000434367 631 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS4BO75351 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VPS4BO75351 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS4BO75351 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS4BO75351 FGF7P6-202ENST00000451282 293 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 RPL23AP56-201ENST00000460778 453 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 AC010326.1-201ENST00000462726 602 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 AC022795.1-201ENST00000473808 480 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 AC017015.1-201ENST00000477387 286 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 TMED11P-201ENST00000479478 690 ntBASIC4.58□□□□□ -1.68
VPS4BO75351 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS4BO75351 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
VPS4BO75351 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
VPS4BO75351 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms