Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 TMEM248P1-201ENST00000510579 951 ntBASIC3.16□□□□□ -1.9
SHOX2O60902 RN7SKP277-201ENST00000516895 283 ntBASIC3.16□□□□□ -1.9
SHOX2O60902 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.16□□□□□ -1.9
SHOX2O60902 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.16□□□□□ -1.9
SHOX2O60902 AP000857.1-201ENST00000532151 543 ntBASIC3.16□□□□□ -1.9
SHOX2O60902 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.16□□□□□ -1.9
SHOX2O60902 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.16□□□□□ -1.9
SHOX2O60902 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.16□□□□□ -1.9
SHOX2O60902 GTF2IP22-201ENST00000554443 182 ntBASIC3.16□□□□□ -1.9
SHOX2O60902 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.16□□□□□ -1.9
SHOX2O60902 AC090751.1-201ENST00000566966 267 ntBASIC3.16□□□□□ -1.9
SHOX2O60902 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.16□□□□□ -1.9
SHOX2O60902 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.16□□□□□ -1.9
SHOX2O60902 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.16□□□□□ -1.9
SHOX2O60902 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.16□□□□□ -1.9
SHOX2O60902 AC020914.6-201ENST00000594327 272 ntBASIC3.16□□□□□ -1.9
SHOX2O60902 AC010591.1-201ENST00000603941 649 ntBASIC3.16□□□□□ -1.9
SHOX2O60902 AC068722.2-201ENST00000618734 544 ntBASIC3.16□□□□□ -1.9
SHOX2O60902 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
SHOX2O60902 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.16□□□□□ -1.9
SHOX2O60902 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
SHOX2O60902 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
SHOX2O60902 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.9
SHOX2O60902 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
SHOX2O60902 NSRP1P1-201ENST00000444067 1693 ntBASIC3.15□□□□□ -1.9
SHOX2O60902 METTL21EP-201ENST00000298105 713 ntBASIC3.15□□□□□ -1.91
SHOX2O60902 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHOX2O60902 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHOX2O60902 RNU2-21P-201ENST00000410368 188 ntBASIC3.15□□□□□ -1.91
SHOX2O60902 RPL31P2-201ENST00000413849 377 ntBASIC3.15□□□□□ -1.91
SHOX2O60902 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.15□□□□□ -1.91
SHOX2O60902 RPS15AP40-201ENST00000419621 391 ntBASIC3.15□□□□□ -1.91
SHOX2O60902 PSMA2P3-201ENST00000429685 675 ntBASIC3.15□□□□□ -1.91
SHOX2O60902 CKS1BP5-201ENST00000434172 273 ntBASIC3.15□□□□□ -1.91
SHOX2O60902 RPL7P29-201ENST00000437151 728 ntBASIC3.15□□□□□ -1.91
SHOX2O60902 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHOX2O60902 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.15□□□□□ -1.91
SHOX2O60902 RPL21P10-201ENST00000463521 490 ntBASIC3.15□□□□□ -1.91
SHOX2O60902 AC025518.1-201ENST00000479856 347 ntBASIC3.15□□□□□ -1.91
SHOX2O60902 RN7SL633P-201ENST00000488974 297 ntBASIC3.15□□□□□ -1.91
SHOX2O60902 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.15□□□□□ -1.91
SHOX2O60902 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.15□□□□□ -1.91
SHOX2O60902 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.15□□□□□ -1.91
SHOX2O60902 RNU6-889P-201ENST00000517189 103 ntBASIC3.15□□□□□ -1.91
SHOX2O60902 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.15□□□□□ -1.91
SHOX2O60902 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.15□□□□□ -1.91
SHOX2O60902 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.15□□□□□ -1.91
SHOX2O60902 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.15□□□□□ -1.91
SHOX2O60902 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.15□□□□□ -1.91
SHOX2O60902 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
SHOX2O60902 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
SHOX2O60902 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHOX2O60902 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
SHOX2O60902 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHOX2O60902 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.14□□□□□ -1.91
SHOX2O60902 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHOX2O60902 RNU6-98P-201ENST00000384173 107 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 MIR607-201ENST00000385241 96 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 MTATP6P31-201ENST00000406985 692 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.14□□□□□ -1.91
SHOX2O60902 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.14□□□□□ -1.91
SHOX2O60902 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHOX2O60902 AL512649.1-201ENST00000428997 581 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 HMGB1P45-201ENST00000435986 653 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 HMGB1P48-201ENST00000446155 598 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 BX276092.4-201ENST00000452056 248 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 AL590639.1-201ENST00000456484 337 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 AC104689.1-201ENST00000473356 768 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 RN7SL297P-201ENST00000483161 293 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 AC069306.1-201ENST00000507006 843 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 FCF1P8-201ENST00000510322 597 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.14□□□□□ -1.91
SHOX2O60902 OR4A45P-201ENST00000529954 901 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.14□□□□□ -1.91
SHOX2O60902 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.14□□□□□ -1.91
SHOX2O60902 AC010653.1-201ENST00000571108 881 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 AC005412.1-201ENST00000580812 1049 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 AC090616.5-202ENST00000582111 297 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.14□□□□□ -1.91
SHOX2O60902 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.14□□□□□ -1.91
SHOX2O60902 AC011468.4-201ENST00000603942 409 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 SUMO2P14-201ENST00000604488 293 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 AL451074.6-201ENST00000608512 729 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 LINC00216-201ENST00000623548 1126 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 AC009093.8-201ENST00000641769 292 ntBASIC3.14□□□□□ -1.91
SHOX2O60902 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.14□□□□□ -1.91
SHOX2O60902 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.14□□□□□ -1.91
SHOX2O60902 AC108206.1-201ENST00000570186 4159 ntBASIC3.13□□□□□ -1.91
SHOX2O60902 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHOX2O60902 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.13□□□□□ -1.91
SHOX2O60902 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.13□□□□□ -1.91
SHOX2O60902 AP000567.1-201ENST00000406413 156 ntBASIC3.13□□□□□ -1.91
SHOX2O60902 RNA5SP274-201ENST00000410484 108 ntBASIC3.13□□□□□ -1.91
SHOX2O60902 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.13□□□□□ -1.91
SHOX2O60902 FO393419.3-201ENST00000428741 282 ntBASIC3.13□□□□□ -1.91
SHOX2O60902 MTCO1P43-201ENST00000431831 488 ntBASIC3.13□□□□□ -1.91
SHOX2O60902 MRPS33P4-201ENST00000434892 317 ntBASIC3.13□□□□□ -1.91
SHOX2O60902 AC006994.1-201ENST00000438212 839 ntBASIC3.13□□□□□ -1.91
SHOX2O60902 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms