Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX3O60493 MT-TC-201ENST00000387405 66 ntBASIC3.66□□□□□ -1.82
SNX3O60493 MIR550A3-201ENST00000390735 95 ntBASIC3.66□□□□□ -1.82
SNX3O60493 MIR1250-201ENST00000408098 113 ntBASIC3.66□□□□□ -1.82
SNX3O60493 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX3O60493 RPL23AP26-201ENST00000412728 464 ntBASIC3.66□□□□□ -1.82
SNX3O60493 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX3O60493 MTCO2P21-201ENST00000419780 677 ntBASIC3.66□□□□□ -1.82
SNX3O60493 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX3O60493 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX3O60493 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX3O60493 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SNX3O60493 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX3O60493 TRGVB-201ENST00000453257 471 ntBASIC3.66□□□□□ -1.82
SNX3O60493 RPL18AP17-201ENST00000455326 198 ntBASIC3.66□□□□□ -1.82
SNX3O60493 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX3O60493 AC010587.2-201ENST00000511727 448 ntBASIC3.66□□□□□ -1.82
SNX3O60493 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX3O60493 AC023538.1-201ENST00000534576 736 ntBASIC3.66□□□□□ -1.82
SNX3O60493 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX3O60493 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX3O60493 MIR4436B2-201ENST00000581415 91 ntBASIC3.66□□□□□ -1.82
SNX3O60493 MIR4436B1-201ENST00000583272 91 ntBASIC3.66□□□□□ -1.82
SNX3O60493 AC083899.3-201ENST00000603413 594 ntBASIC3.66□□□□□ -1.82
SNX3O60493 AC009220.3-201ENST00000604318 586 ntBASIC3.66□□□□□ -1.82
SNX3O60493 AL158042.1-201ENST00000605338 460 ntBASIC3.66□□□□□ -1.82
SNX3O60493 HMGN2P28-201ENST00000606102 262 ntBASIC3.66□□□□□ -1.82
SNX3O60493 FAM25E-202ENST00000608562 189 ntBASIC3.66□□□□□ -1.82
SNX3O60493 AP000676.4-201ENST00000624659 623 ntBASIC3.66□□□□□ -1.82
SNX3O60493 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX3O60493 MIR1322-201ENST00000638013 71 ntBASIC3.66□□□□□ -1.82
SNX3O60493 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SNX3O60493 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX3O60493 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX3O60493 MTND5P3-201ENST00000438536 1800 ntBASIC3.65□□□□□ -1.82
SNX3O60493 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
SNX3O60493 AP001486.2-201ENST00000561652 5113 ntBASIC3.65□□□□□ -1.82
SNX3O60493 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
SNX3O60493 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SNX3O60493 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNX3O60493 RNU6-339P-201ENST00000384310 107 ntBASIC3.65□□□□□ -1.83
SNX3O60493 Y_RNA.493-201ENST00000384422 102 ntBASIC3.65□□□□□ -1.83
SNX3O60493 RNU6-1122P-201ENST00000384449 107 ntBASIC3.65□□□□□ -1.83
SNX3O60493 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNX3O60493 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.65□□□□□ -1.83
SNX3O60493 AC136624.1-201ENST00000400791 413 ntBASIC3.65□□□□□ -1.83
SNX3O60493 SKINT1L-201ENST00000401057 817 ntBASIC3.65□□□□□ -1.83
SNX3O60493 MTND4LP20-201ENST00000402379 270 ntBASIC3.65□□□□□ -1.83
SNX3O60493 RNU6-757P-201ENST00000410334 100 ntBASIC3.65□□□□□ -1.83
SNX3O60493 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX3O60493 TIMM9P2-201ENST00000419324 266 ntBASIC3.65□□□□□ -1.83
SNX3O60493 FNDC3CP-201ENST00000420795 1155 ntBASIC3.65□□□□□ -1.83
SNX3O60493 RPS27AP12-201ENST00000429552 465 ntBASIC3.65□□□□□ -1.83
SNX3O60493 RPS3AP46-201ENST00000448352 682 ntBASIC3.65□□□□□ -1.83
SNX3O60493 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX3O60493 AL513533.1-201ENST00000453728 415 ntBASIC3.65□□□□□ -1.83
SNX3O60493 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX3O60493 RPL7P18-201ENST00000478965 734 ntBASIC3.65□□□□□ -1.83
SNX3O60493 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX3O60493 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX3O60493 NDUFA5P12-201ENST00000503796 343 ntBASIC3.65□□□□□ -1.83
SNX3O60493 RNU6-583P-201ENST00000516012 92 ntBASIC3.65□□□□□ -1.83
SNX3O60493 SNORA70.14-201ENST00000516205 110 ntBASIC3.65□□□□□ -1.83
SNX3O60493 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX3O60493 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX3O60493 OR6C73P-201ENST00000546432 358 ntBASIC3.65□□□□□ -1.83
SNX3O60493 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SNX3O60493 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.65□□□□□ -1.83
SNX3O60493 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.65□□□□□ -1.83
SNX3O60493 AC107954.1-201ENST00000565906 727 ntBASIC3.65□□□□□ -1.83
SNX3O60493 AL512347.1-201ENST00000566420 503 ntBASIC3.65□□□□□ -1.83
SNX3O60493 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX3O60493 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX3O60493 VN1R78P-201ENST00000597393 564 ntBASIC3.65□□□□□ -1.83
SNX3O60493 AL159169.3-201ENST00000608871 561 ntBASIC3.65□□□□□ -1.83
SNX3O60493 AC100827.5-201ENST00000615883 426 ntBASIC3.65□□□□□ -1.83
SNX3O60493 AC021755.4-201ENST00000616620 456 ntBASIC3.65□□□□□ -1.83
SNX3O60493 AL357559.1-201ENST00000622228 274 ntBASIC3.65□□□□□ -1.83
SNX3O60493 AC011944.2-201ENST00000624440 683 ntBASIC3.65□□□□□ -1.83
SNX3O60493 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SNX3O60493 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX3O60493 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
SNX3O60493 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNX3O60493 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX3O60493 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNX3O60493 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX3O60493 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX3O60493 AC068647.1-201ENST00000489539 2265 ntBASIC3.64□□□□□ -1.83
SNX3O60493 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNX3O60493 RNU6-263P-201ENST00000363811 107 ntBASIC3.64□□□□□ -1.83
SNX3O60493 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNX3O60493 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SNX3O60493 RNU6-157P-201ENST00000383957 107 ntBASIC3.64□□□□□ -1.83
SNX3O60493 RNA5SP424-201ENST00000390988 115 ntBASIC3.64□□□□□ -1.83
SNX3O60493 MTHFD2P2-201ENST00000407725 247 ntBASIC3.64□□□□□ -1.83
SNX3O60493 RNA5SP293-201ENST00000410527 113 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC016397.1-201ENST00000412463 242 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AC006960.1-201ENST00000419980 153 ntBASIC3.64□□□□□ -1.83
SNX3O60493 MTCYBP24-201ENST00000420387 1106 ntBASIC3.64□□□□□ -1.83
SNX3O60493 AL590762.4-201ENST00000425885 253 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms