Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.76□□□□□ -1.33
ACTN4O43707 AC130454.1-201ENST00000622948 401 ntBASIC6.76□□□□□ -1.33
ACTN4O43707 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
ACTN4O43707 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.76□□□□□ -1.33
ACTN4O43707 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
ACTN4O43707 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ACTN4O43707 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ACTN4O43707 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.76□□□□□ -1.33
ACTN4O43707 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ACTN4O43707 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ACTN4O43707 AC008669.1-201ENST00000565823 2178 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ACTN4O43707 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ACTN4O43707 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
ACTN4O43707 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ACTN4O43707 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ACTN4O43707 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
ACTN4O43707 RN7SKP162-201ENST00000363605 345 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 RNU5E-6P-201ENST00000365574 115 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 RNU6-398P-201ENST00000384143 109 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 RNU6-378P-201ENST00000384324 107 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 Y_RNA.539-201ENST00000384635 107 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 SNORD70.1-201ENST00000391007 85 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 PCNPP3-201ENST00000393579 471 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 MYL6P5-201ENST00000412707 459 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.75□□□□□ -1.33
ACTN4O43707 RPL35AP31-201ENST00000418340 337 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.75□□□□□ -1.33
ACTN4O43707 RPL7AP51-201ENST00000422016 760 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.75□□□□□ -1.33
ACTN4O43707 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.75□□□□□ -1.33
ACTN4O43707 CALM2P2-201ENST00000428512 440 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.75□□□□□ -1.33
ACTN4O43707 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.75□□□□□ -1.33
ACTN4O43707 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.75□□□□□ -1.33
ACTN4O43707 CHEK2P4-201ENST00000450340 246 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 AC002553.3-201ENST00000453002 341 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 AP001992.1-205ENST00000462248 379 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.75□□□□□ -1.33
ACTN4O43707 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.75□□□□□ -1.33
ACTN4O43707 AC116917.1-201ENST00000520558 305 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 AC079600.1-201ENST00000550326 297 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.75□□□□□ -1.33
ACTN4O43707 MT1CP-201ENST00000567054 174 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.75□□□□□ -1.33
ACTN4O43707 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.75□□□□□ -1.33
ACTN4O43707 AL138960.1-201ENST00000613838 513 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 AC022467.1-201ENST00000614738 749 ntBASIC6.75□□□□□ -1.33
ACTN4O43707 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.75□□□□□ -1.33
ACTN4O43707 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
ACTN4O43707 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ACTN4O43707 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.75□□□□□ -1.33
ACTN4O43707 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
ACTN4O43707 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ACTN4O43707 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ACTN4O43707 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
ACTN4O43707 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.75□□□□□ -1.33
ACTN4O43707 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ACTN4O43707 AL731532.1-201ENST00000623972 4236 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ACTN4O43707 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.74□□□□□ -1.33
ACTN4O43707 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.74□□□□□ -1.33
ACTN4O43707 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
ACTN4O43707 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ACTN4O43707 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ACTN4O43707 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
ACTN4O43707 Y_RNA.526-201ENST00000384572 110 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
ACTN4O43707 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ACTN4O43707 AL451074.5-201ENST00000415894 435 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.74□□□□□ -1.33
ACTN4O43707 FAM183DP-201ENST00000421987 399 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.74□□□□□ -1.33
ACTN4O43707 RPL21P109-201ENST00000422213 475 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 FAR2P4-202ENST00000425399 584 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.74□□□□□ -1.33
ACTN4O43707 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.74□□□□□ -1.33
ACTN4O43707 AC004383.1-201ENST00000438135 289 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ACTN4O43707 AC016027.4-201ENST00000450866 277 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.74□□□□□ -1.33
ACTN4O43707 snoU13.29-201ENST00000459370 104 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 AC108078.2-201ENST00000510750 236 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.74□□□□□ -1.33
ACTN4O43707 RNU6-397P-201ENST00000516226 104 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 RN7SKP288-201ENST00000516227 268 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.74□□□□□ -1.33
ACTN4O43707 AP003733.2-201ENST00000529409 171 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 RANP3-201ENST00000530970 276 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.74□□□□□ -1.33
ACTN4O43707 AC015720.2-201ENST00000567709 334 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.74□□□□□ -1.33
ACTN4O43707 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ACTN4O43707 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.74□□□□□ -1.33
ACTN4O43707 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ACTN4O43707 AC009779.8-202ENST00000607990 932 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 AL136313.1-201ENST00000624804 202 ntBASIC6.74□□□□□ -1.33
ACTN4O43707 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.74□□□□□ -1.33
ACTN4O43707 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ACTN4O43707 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms