Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 OR5H5P-201ENST00000503164 928 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC091951.3-201ENST00000504093 246 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 HMGB1P28-201ENST00000507778 552 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC116353.3-201ENST00000511215 249 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 RNA5SP179-201ENST00000517284 121 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AL139174.1-201ENST00000531489 886 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC125611.1-201ENST00000549563 229 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 GNRHR2P1-201ENST00000555315 631 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 MTND4P33-201ENST00000556706 766 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC015726.1-201ENST00000602353 681 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 IGHV3-29-201ENST00000604817 344 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC091167.4-201ENST00000605079 184 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC109809.1-201ENST00000619665 545 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 C2orf27A-204ENST00000623058 969 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC006963.1-201ENST00000624003 1052 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC116618.1-201ENST00000634617 774 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 ZNF37BP-203ENST00000452306 1352 ntBASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.6□□□□□ -1.83
NPIPA3F8WFD2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 RNU6-730P-201ENST00000383954 104 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 RNU6-213P-201ENST00000384051 104 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 RNU6-761P-201ENST00000384148 107 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 MIR30B-201ENST00000384850 88 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 RPL7AP73-201ENST00000413490 353 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 HIGD1AP4-201ENST00000430194 280 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 ELOCP8-201ENST00000439309 332 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 FGF7P5-201ENST00000441829 291 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 ELOCP15-201ENST00000442090 332 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 HMGN2P21-201ENST00000447764 270 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 RPL39P6-201ENST00000448289 150 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 SLC31A1P1-201ENST00000451221 567 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 NECAP1P2-201ENST00000455668 727 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 MTND1P16-201ENST00000465177 898 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 RPS3AP6-201ENST00000484430 795 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 RN7SL323P-201ENST00000494712 295 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 MTCYBP17-201ENST00000503579 789 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AP001636.2-201ENST00000525517 696 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 SLC2A13P1-201ENST00000531560 322 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AP003385.6-201ENST00000531603 374 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AC069240.1-201ENST00000548774 375 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 HIGD1AP17-201ENST00000554576 276 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AL133457.1-201ENST00000564251 987 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AC022662.1-201ENST00000580252 331 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AL669831.4-202ENST00000590817 238 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AL049634.3-201ENST00000604968 457 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AC012603.1-201ENST00000606424 528 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AC128687.2-201ENST00000609657 566 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AC103858.2-201ENST00000621471 543 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AC112200.1-201ENST00000625015 234 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AL773545.4-201ENST00000637262 310 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 U6.101-201ENST00000637707 76 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 OR8B1P-202ENST00000641132 1178 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 AL513478.4-201ENST00000641636 310 ntBASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPIPA3F8WFD2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NPIPA3F8WFD2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NPIPA3F8WFD2 MAPK10-373ENST00000641983 6772 ntBASIC3.59□□□□□ -1.84
NPIPA3F8WFD2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.59□□□□□ -1.84
NPIPA3F8WFD2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NPIPA3F8WFD2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.58□□□□□ -1.84
NPIPA3F8WFD2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NPIPA3F8WFD2 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPIPA3F8WFD2 RNU6-989P-201ENST00000362756 107 ntBASIC3.58□□□□□ -1.84
NPIPA3F8WFD2 RNA5SP97-201ENST00000365006 84 ntBASIC3.58□□□□□ -1.84
NPIPA3F8WFD2 RNU6-1122P-201ENST00000384449 107 ntBASIC3.58□□□□□ -1.84
NPIPA3F8WFD2 RNA5SP171-201ENST00000391071 115 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms