Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TBC1D3FA6NER0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 SPRR2C-201ENST00000290702 219 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 RNU1-14P-201ENST00000362759 152 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP307-201ENST00000362863 116 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 RNU6-501P-201ENST00000364072 100 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 RNU6-730P-201ENST00000383954 104 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 RNU1-13P-201ENST00000384499 162 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 HMGB1P11-201ENST00000413899 637 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AL589823.1-201ENST00000429577 183 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 COX6B1P7-201ENST00000430845 235 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 SNRPEP7-201ENST00000438350 220 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 RPL7AP28-201ENST00000464513 571 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC091564.1-201ENST00000464563 479 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC116337.2-201ENST00000477662 156 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 UBTFL6-201ENST00000477929 1024 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC093809.1-201ENST00000509155 340 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 RN7SKP234-201ENST00000517173 224 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC134698.5-201ENST00000519444 336 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AL352979.3-201ENST00000553515 247 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 MIR5186-201ENST00000577504 120 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC090312.1-201ENST00000580637 348 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 OR4G1P-201ENST00000588632 938 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC080013.4-201ENST00000607624 649 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AP002360.3-201ENST00000607673 710 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AL513477.2-201ENST00000607858 568 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP196-201ENST00000625967 102 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 AL359893.1-201ENST00000447628 1580 ntBASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
TBC1D3FA6NER0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AL049555.1-201ENST00000562834 1933 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP388-201ENST00000362584 119 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 RNU6-289P-201ENST00000364093 107 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 RNU6-343P-201ENST00000364709 104 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 RNU1-64P-201ENST00000365443 163 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP151-201ENST00000365632 117 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 MIR195-201ENST00000385194 87 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 RPL31P1-201ENST00000398116 372 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 OR51AB1P-201ENST00000429046 620 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 PRELID3BP10-201ENST00000431957 584 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AL356276.2-201ENST00000435919 558 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AL353706.1-201ENST00000436728 494 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 LSM1P1-201ENST00000438629 273 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AL831737.1-201ENST00000441288 271 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 COX6CP2-201ENST00000444980 225 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 HSFY6P-201ENST00000445573 403 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC005297.2-201ENST00000450430 606 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 RPL23AP81-201ENST00000455252 467 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC004069.2-201ENST00000505438 1114 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AL592156.1-201ENST00000508758 304 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.29□□□□□ -1.72
TBC1D3FA6NER0 OR8R1P-201ENST00000543943 764 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms