Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 SNORA40.3-201ENST00000390964 122 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 Y_RNA.582-201ENST00000391023 95 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 RPL18P10-201ENST00000425606 538 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 ISCA1P1-201ENST00000426679 387 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 DNAJC19P7-201ENST00000428811 344 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 MTATP6P23-201ENST00000440153 476 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 RPL39P6-201ENST00000448289 150 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AL033528.1-201ENST00000453780 140 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC092757.1-201ENST00000467293 467 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 LARP1BP2-201ENST00000486594 519 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC114981.1-201ENST00000503897 678 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC108475.1-201ENST00000507880 950 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AP000790.1-201ENST00000528891 737 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC068587.4-201ENST00000533893 186 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 EEF1B2P4-201ENST00000551398 348 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AL389895.1-201ENST00000554127 252 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 ZNF519P2-201ENST00000557032 169 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 SULT1C2P1-202ENST00000562418 459 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 MIR4700-201ENST00000578311 74 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 BNIP3P11-201ENST00000603878 563 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC023813.4-201ENST00000607580 580 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AL513477.2-201ENST00000607858 568 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 U4.5-201ENST00000617137 123 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AL139089.1-201ENST00000620372 975 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AL603839.4-201ENST00000624658 1005 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AP005264.7-201ENST00000625003 745 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 MIR7641-1-201ENST00000627518 61 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AC093591.3-201ENST00000634516 308 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 AP000550.3-201ENST00000637734 379 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 SAMMSON-213ENST00000641336 1521 ntBASIC4.36□□□□□ -1.71
TCRBV5S1A1TA0A578 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 MIR92A2-201ENST00000385299 75 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 RPL23AP26-201ENST00000412728 464 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 OR8G2P-201ENST00000412796 908 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 USP9YP13-201ENST00000417797 480 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 CHIAP3-201ENST00000423668 1133 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 NPM1P24-201ENST00000428039 894 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 COX6B1P7-201ENST00000430845 235 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC006011.1-201ENST00000442758 349 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 VN1R10P-201ENST00000447106 875 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 SEPT7P3-201ENST00000455017 621 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 RN7SL481P-201ENST00000477764 299 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AF213884.1-201ENST00000488102 463 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC023424.2-201ENST00000493479 777 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AL358832.1-201ENST00000497800 389 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC093809.1-201ENST00000509155 340 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AF131216.2-201ENST00000512316 564 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 RNA5SP154-201ENST00000516193 111 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 RNU6-506P-201ENST00000516553 94 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AP002748.2-201ENST00000528671 348 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AC018552.1-201ENST00000562099 811 ntBASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.35□□□□□ -1.71
TCRBV5S1A1TA0A578 SNORD39.3-201ENST00000584451 71 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms