Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC008759.3-201ENST00000613300 508 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 uc_338.25-201ENST00000613756 156 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC018926.1-201ENST00000616335 435 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 C2orf27A-204ENST00000623058 969 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 PWAR6-201ENST00000552334 4618 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC016716.1-201ENST00000265882 708 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AL512646.1-201ENST00000269395 1077 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 U6.112-201ENST00000384129 70 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 MCTS2P-201ENST00000394552 546 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 RNU2-21P-201ENST00000410368 188 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC092638.1-201ENST00000411966 1275 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC127526.1-201ENST00000417526 366 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC013262.1-201ENST00000426710 252 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 RPL23AP69-201ENST00000431134 458 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC105402.2-201ENST00000438503 358 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC233982.1-201ENST00000451247 436 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC008280.2-201ENST00000455473 307 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 CDC42P1-201ENST00000456658 548 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AL136126.1-201ENST00000473603 402 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 MTND3P3-201ENST00000505004 126 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 PTGES3P3-201ENST00000511479 482 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AF279873.1-201ENST00000523393 313 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AL139174.1-201ENST00000531489 886 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AP003117.2-201ENST00000606010 545 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC078899.5-201ENST00000612475 178 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC105227.2-201ENST00000615075 605 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC007275.1-201ENST00000621243 671 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AL121594.5-201ENST00000631724 573 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AC073055.1-201ENST00000456901 1621 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 AL353743.1-202ENST00000431724 1695 ntBASIC3.43□□□□□ -1.86
SMIM28A0A1B0GU29 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 HSPA8P1-201ENST00000425843 1833 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AC095050.2-201ENST00000510748 1458 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 MTCO1P6-201ENST00000481192 1384 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 OR1S2-201ENST00000302592 978 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 MIR423-201ENST00000362201 94 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 RNU5B-1-201ENST00000363286 116 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 RNU5B-4P-201ENST00000363508 111 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 RNU6-353P-201ENST00000364266 108 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 MIR3074-201ENST00000384885 81 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 RPL17P50-201ENST00000396131 546 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AL355615.1-201ENST00000406187 641 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AC004987.3-201ENST00000413879 771 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 TAF13P2-201ENST00000416876 286 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AC092832.1-201ENST00000422934 400 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AL050341.1-201ENST00000447743 313 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 Z99127.3-201ENST00000448158 395 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 BX248409.1-201ENST00000455497 255 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 S100A11P2-201ENST00000467589 312 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 RPL21P103-201ENST00000479921 488 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AC021146.1-201ENST00000511202 716 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 FTH1P9-201ENST00000513251 355 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 PTP4A1P6-201ENST00000531034 478 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AC068620.3-201ENST00000602749 560 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 BNIP3P31-201ENST00000604515 566 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AC013468.1-201ENST00000608680 598 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AL713922.2-201ENST00000619384 716 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AL590396.4-201ENST00000636779 956 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 AC008725.1-201ENST00000605123 2263 ntBASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SMIM28A0A1B0GU29 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SMIM28A0A1B0GU29 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms