Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.89■■□□□ 1.25
PCDHAC2Q9Y5I4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
PCDHAC2Q9Y5I4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.89■■□□□ 1.25
PCDHAC2Q9Y5I4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHAC2Q9Y5I4 GABARAPL3-202ENST00000624044 1851 ntBASIC22.89■■□□□ 1.25
PCDHAC2Q9Y5I4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHAC2Q9Y5I4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHAC2Q9Y5I4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHAC2Q9Y5I4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
PCDHAC2Q9Y5I4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHAC2Q9Y5I4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDHAC2Q9Y5I4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 NEK4P2-201ENST00000580004 1012 ntBASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHAC2Q9Y5I4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 TSPY21P-201ENST00000433481 731 ntBASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHAC2Q9Y5I4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 AL157384.1-201ENST00000445995 2473 ntBASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHAC2Q9Y5I4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHAC2Q9Y5I4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHAC2Q9Y5I4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms