Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA1Q9Y5H4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGA1Q9Y5H4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGA1Q9Y5H4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA1Q9Y5H4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA1Q9Y5H4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA1Q9Y5H4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA1Q9Y5H4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGA1Q9Y5H4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 NPAP1P7-201ENST00000613027 823 ntBASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 SMG8-203ENST00000578922 2178 ntBASIC18.47■□□□□ 0.55
PCDHGA1Q9Y5H4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 SPDYE15P-201ENST00000424157 909 ntBASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 AC012313.10-201ENST00000623509 926 ntBASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 LINC01465-201ENST00000408887 1940 ntBASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 KRT8P11-201ENST00000409686 1436 ntBASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA1Q9Y5H4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.46■□□□□ 0.54
PCDHGA1Q9Y5H4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 MIR3652-201ENST00000579335 131 ntBASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA1Q9Y5H4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 HBZP1-201ENST00000354915 429 ntBASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 AC034232.1-201ENST00000506026 1064 ntBASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA1Q9Y5H4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms