Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 KRT16P1-201ENST00000399124 1418 ntBASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 ZNF815P-204ENST00000434898 1737 ntBASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 SLC25A3P1-201ENST00000443844 931 ntBASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB9Q9Y5E1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHB9Q9Y5E1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHB9Q9Y5E1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHB9Q9Y5E1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
PCDHB9Q9Y5E1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 AL390955.1-201ENST00000428694 934 ntBASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 ATP5G1P1-201ENST00000448724 379 ntBASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 DUX4L26-201ENST00000489078 1255 ntBASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHB9Q9Y5E1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 FITM1-202ENST00000559294 800 ntBASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 AC131212.4-201ENST00000623606 975 ntBASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB9Q9Y5E1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 CYP2D8P-201ENST00000433633 1490 ntBASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB9Q9Y5E1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms