Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 Z85996.1-201ENST00000494644 937 ntBASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 INGX-201ENST00000359239 846 ntBASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 WWOX-216ENST00000569818 525 ntBASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSX2IPQ9Y2D8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSX2IPQ9Y2D8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSX2IPQ9Y2D8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSX2IPQ9Y2D8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.64■□□□□ 0.9
SSX2IPQ9Y2D8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.64■□□□□ 0.9
SSX2IPQ9Y2D8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 CA15P1-201ENST00000481698 905 ntBASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 AC063952.2-201ENST00000498792 1227 ntBASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SSX2IPQ9Y2D8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 AC007663.1-201ENST00000438948 1240 ntBASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 AC022616.7-201ENST00000525383 220 ntBASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 AL138966.2-201ENST00000621997 464 ntBASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 FEM1AP1-201ENST00000431297 1995 ntBASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SSX2IPQ9Y2D8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 RNF152P1-201ENST00000397754 604 ntBASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSX2IPQ9Y2D8 AC092338.2-201ENST00000568827 1415 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms