Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 POU5F1P3-201ENST00000428824 1078 ntBASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 HLA-A-209ENST00000638375 975 ntBASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VPS9D1Q9Y2B5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 AP000974.1-201ENST00000623909 2387 ntBASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 TSPY21P-201ENST00000433481 731 ntBASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS9D1Q9Y2B5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 AC138932.1-201ENST00000534164 6830 ntBASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS9D1Q9Y2B5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS9D1Q9Y2B5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS9D1Q9Y2B5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
VPS9D1Q9Y2B5 AC128676.1-201ENST00000454392 318 ntBASIC19.08■□□□□ 0.64
VPS9D1Q9Y2B5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS9D1Q9Y2B5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS9D1Q9Y2B5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
VPS9D1Q9Y2B5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS9D1Q9Y2B5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS9D1Q9Y2B5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS9D1Q9Y2B5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
VPS9D1Q9Y2B5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
VPS9D1Q9Y2B5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms