Protein–RNA interactions for Protein: Q9NYF3

FAM53C, Protein FAM53C, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53CQ9NYF3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FAM53CQ9NYF3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
FAM53CQ9NYF3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
FAM53CQ9NYF3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
FAM53CQ9NYF3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.64■□□□□ 0.74
FAM53CQ9NYF3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 YBX1P4-201ENST00000392794 808 ntBASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 AC091799.1-201ENST00000422823 811 ntBASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FAM53CQ9NYF3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 MIR6724-1-201ENST00000616420 92 ntBASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 MIR6724-2-201ENST00000616483 92 ntBASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 MIR6724-4-201ENST00000617390 92 ntBASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 MIR6724-3-201ENST00000622482 92 ntBASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FAM53CQ9NYF3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 AC007322.3-201ENST00000426526 701 ntBASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 AL356652.1-201ENST00000615962 565 ntBASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 PCDH8P1-201ENST00000428983 2773 ntBASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FAM53CQ9NYF3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 KRT8P33-201ENST00000508125 1423 ntBASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 AC092171.4-201ENST00000609130 632 ntBASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
FAM53CQ9NYF3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FAM53CQ9NYF3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FAM53CQ9NYF3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FAM53CQ9NYF3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.6■□□□□ 0.73
FAM53CQ9NYF3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms