Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDT1Q9H211 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDT1Q9H211 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.86■□□□□ 0.93
CDT1Q9H211 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.86■□□□□ 0.93
CDT1Q9H211 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDT1Q9H211 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CDT1Q9H211 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.85■□□□□ 0.93
CDT1Q9H211 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDT1Q9H211 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.85■□□□□ 0.93
CDT1Q9H211 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDT1Q9H211 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDT1Q9H211 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.85■□□□□ 0.93
CDT1Q9H211 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDT1Q9H211 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CDT1Q9H211 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.85■□□□□ 0.93
CDT1Q9H211 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDT1Q9H211 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.85■□□□□ 0.93
CDT1Q9H211 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDT1Q9H211 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDT1Q9H211 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDT1Q9H211 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CDT1Q9H211 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDT1Q9H211 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 KRT18P22-201ENST00000402024 1347 ntBASIC20.84■□□□□ 0.93
CDT1Q9H211 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.84■□□□□ 0.93
CDT1Q9H211 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CDT1Q9H211 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 TSPY21P-201ENST00000433481 731 ntBASIC20.84■□□□□ 0.93
CDT1Q9H211 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.84■□□□□ 0.93
CDT1Q9H211 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.84■□□□□ 0.93
CDT1Q9H211 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDT1Q9H211 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.84■□□□□ 0.93
CDT1Q9H211 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.84■□□□□ 0.93
CDT1Q9H211 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.84■□□□□ 0.93
CDT1Q9H211 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDT1Q9H211 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.84■□□□□ 0.93
CDT1Q9H211 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CDT1Q9H211 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDT1Q9H211 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.83■□□□□ 0.93
CDT1Q9H211 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.83■□□□□ 0.93
CDT1Q9H211 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.83■□□□□ 0.93
CDT1Q9H211 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDT1Q9H211 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CDT1Q9H211 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.83■□□□□ 0.93
CDT1Q9H211 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.83■□□□□ 0.93
CDT1Q9H211 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.83■□□□□ 0.93
CDT1Q9H211 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDT1Q9H211 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CDT1Q9H211 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
CDT1Q9H211 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.83■□□□□ 0.93
CDT1Q9H211 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.83■□□□□ 0.93
CDT1Q9H211 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CDT1Q9H211 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.83■□□□□ 0.92
CDT1Q9H211 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDT1Q9H211 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.83■□□□□ 0.92
CDT1Q9H211 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.82■□□□□ 0.92
CDT1Q9H211 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDT1Q9H211 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CDT1Q9H211 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CDT1Q9H211 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDT1Q9H211 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDT1Q9H211 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDT1Q9H211 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDT1Q9H211 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDT1Q9H211 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDT1Q9H211 RCN1P1-201ENST00000400413 996 ntBASIC20.82■□□□□ 0.92
CDT1Q9H211 SLC25A1P2-201ENST00000430693 912 ntBASIC20.82■□□□□ 0.92
CDT1Q9H211 ECEL1P2-202ENST00000465689 757 ntBASIC20.82■□□□□ 0.92
CDT1Q9H211 AL023803.3-201ENST00000615559 522 ntBASIC20.82■□□□□ 0.92
CDT1Q9H211 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDT1Q9H211 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDT1Q9H211 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDT1Q9H211 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.82■□□□□ 0.92
CDT1Q9H211 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CDT1Q9H211 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDT1Q9H211 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDT1Q9H211 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDT1Q9H211 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDT1Q9H211 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.81■□□□□ 0.92
CDT1Q9H211 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDT1Q9H211 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CDT1Q9H211 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDT1Q9H211 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDT1Q9H211 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDT1Q9H211 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CDT1Q9H211 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.81■□□□□ 0.92
CDT1Q9H211 SLC25A3P1-201ENST00000443844 931 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms