Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.77■□□□□ 0.59
PCDH15Q96QU1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PCDH15Q96QU1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PCDH15Q96QU1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
PCDH15Q96QU1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.77■□□□□ 0.59
PCDH15Q96QU1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PCDH15Q96QU1 IFNL4P1-201ENST00000607083 540 ntBASIC18.77■□□□□ 0.59
PCDH15Q96QU1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDH15Q96QU1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
PCDH15Q96QU1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDH15Q96QU1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDH15Q96QU1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 PRELID1P1-202ENST00000567272 903 ntBASIC18.75■□□□□ 0.59
PCDH15Q96QU1 MIR3652-201ENST00000579335 131 ntBASIC18.75■□□□□ 0.59
PCDH15Q96QU1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH15Q96QU1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 AC092119.3-201ENST00000612618 583 ntBASIC18.74■□□□□ 0.59
PCDH15Q96QU1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDH15Q96QU1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 RASA4DP-201ENST00000460726 1199 ntBASIC18.73■□□□□ 0.59
PCDH15Q96QU1 AC092597.1-201ENST00000487352 616 ntBASIC18.73■□□□□ 0.59
PCDH15Q96QU1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 AC099778.1-201ENST00000568593 1911 ntBASIC18.73■□□□□ 0.59
PCDH15Q96QU1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 LINC01006-201ENST00000333319 2292 ntBASIC18.73■□□□□ 0.59
PCDH15Q96QU1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH15Q96QU1 AC036111.1-201ENST00000533973 1582 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms