Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpa1Q8VEE4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rpa1Q8VEE4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpa1Q8VEE4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Rpa1Q8VEE4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Rpa1Q8VEE4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Gm2559-201ENSMUST00000201323 363 ntBASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpa1Q8VEE4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpa1Q8VEE4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Gm24841-201ENSMUST00000158676 357 ntBASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpa1Q8VEE4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rpa1Q8VEE4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms