Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 AC004263.2-201ENST00000617183 678 ntBASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
SNIP1Q8TAD8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 HBZP1-201ENST00000354915 429 ntBASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 FP700111.2-201ENST00000619190 1892 ntBASIC18.12■□□□□ 0.49
SNIP1Q8TAD8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 AL137060.1-201ENST00000618151 2648 ntBASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 TSSC2-201ENST00000450217 709 ntBASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNIP1Q8TAD8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 UNC93B7-201ENST00000509439 705 ntBASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNIP1Q8TAD8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms