Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.48■□□□□ 0.23
HIST2H2BCQ6DN03 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST2H2BCQ6DN03 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST2H2BCQ6DN03 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HIST2H2BCQ6DN03 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST2H2BCQ6DN03 Z83836.1-201ENST00000624605 1642 ntBASIC16.48■□□□□ 0.23
HIST2H2BCQ6DN03 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.48■□□□□ 0.23
HIST2H2BCQ6DN03 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST2H2BCQ6DN03 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST2H2BCQ6DN03 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST2H2BCQ6DN03 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 MIR662-201ENST00000384847 95 ntBASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 UPF3AP3-201ENST00000420996 769 ntBASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 HLA-F-220ENST00000434407 884 ntBASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 PGAM5P1-201ENST00000518923 814 ntBASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 SART3-203ENST00000546611 1184 ntBASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 AL136038.4-201ENST00000603606 1261 ntBASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST2H2BCQ6DN03 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 KRT18P67-201ENST00000432816 1264 ntBASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 IGHV3-41-201ENST00000613121 348 ntBASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 AC112497.1-201ENST00000624824 639 ntBASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 AL391807.1-203ENST00000604392 2365 ntBASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST2H2BCQ6DN03 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HIST2H2BCQ6DN03 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HIST2H2BCQ6DN03 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 MIR7706-201ENST00000613747 67 ntBASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST2H2BCQ6DN03 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms