Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 RNF126P1-202ENST00000569893 925 ntBASIC10.55□□□□□ -0.72
UBR4Q5T4S7 MTDHP5-201ENST00000598980 586 ntBASIC10.55□□□□□ -0.72
UBR4Q5T4S7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 AP002472.1-201ENST00000577490 586 ntBASIC10.55□□□□□ -0.72
UBR4Q5T4S7 AC005336.2-201ENST00000593183 939 ntBASIC10.55□□□□□ -0.72
UBR4Q5T4S7 AL591684.3-201ENST00000605187 298 ntBASIC10.55□□□□□ -0.72
UBR4Q5T4S7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 AC132008.2-207ENST00000454517 770 ntBASIC10.54□□□□□ -0.72
UBR4Q5T4S7 ALG1L5P-201ENST00000482043 771 ntBASIC10.54□□□□□ -0.72
UBR4Q5T4S7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 Z69720.1-201ENST00000601483 472 ntBASIC10.54□□□□□ -0.72
UBR4Q5T4S7 MIR6727-201ENST00000620702 65 ntBASIC10.54□□□□□ -0.72
UBR4Q5T4S7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 RPS2P28-201ENST00000314255 741 ntBASIC10.54□□□□□ -0.72
UBR4Q5T4S7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 AL132655.2-201ENST00000596276 594 ntBASIC10.54□□□□□ -0.72
UBR4Q5T4S7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 AC004832.2-201ENST00000426397 482 ntBASIC10.54□□□□□ -0.72
UBR4Q5T4S7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 AL157888.1-201ENST00000631930 593 ntBASIC10.54□□□□□ -0.72
UBR4Q5T4S7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 AC002347.1-201ENST00000569543 541 ntBASIC10.54□□□□□ -0.72
UBR4Q5T4S7 AC005498.2-205ENST00000593218 784 ntBASIC10.54□□□□□ -0.72
UBR4Q5T4S7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
UBR4Q5T4S7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 AC024243.1-201ENST00000609234 778 ntBASIC10.53□□□□□ -0.72
UBR4Q5T4S7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBR4Q5T4S7 PTBP1P-201ENST00000554374 1601 ntBASIC10.53□□□□□ -0.72
UBR4Q5T4S7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms