Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
HSPG2P98160 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
HSPG2P98160 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
HSPG2P98160 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.93□□□□□ -0.5
HSPG2P98160 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.93□□□□□ -0.5
HSPG2P98160 AC074051.2-201ENST00000565115 352 ntBASIC11.93□□□□□ -0.5
HSPG2P98160 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.93□□□□□ -0.5
HSPG2P98160 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.93□□□□□ -0.5
HSPG2P98160 AC134684.3-201ENST00000641758 218 ntBASIC11.93□□□□□ -0.5
HSPG2P98160 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC11.93□□□□□ -0.5
HSPG2P98160 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 AC010327.4-202ENST00000591484 748 ntBASIC11.93□□□□□ -0.5
HSPG2P98160 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC11.93□□□□□ -0.5
HSPG2P98160 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC11.93□□□□□ -0.5
HSPG2P98160 AL391807.1-203ENST00000604392 2365 ntBASIC11.93□□□□□ -0.5
HSPG2P98160 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.93□□□□□ -0.5
HSPG2P98160 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.93□□□□□ -0.5
HSPG2P98160 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HSPG2P98160 AC009065.1-201ENST00000564055 1225 ntBASIC11.93□□□□□ -0.5
HSPG2P98160 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.93□□□□□ -0.5
HSPG2P98160 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HSPG2P98160 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HSPG2P98160 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HSPG2P98160 PARN-205ENST00000539279 1557 ntTSL 2 BASIC11.92□□□□□ -0.5
HSPG2P98160 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HSPG2P98160 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
HSPG2P98160 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.92□□□□□ -0.5
HSPG2P98160 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HSPG2P98160 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.92□□□□□ -0.5
HSPG2P98160 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.92□□□□□ -0.5
HSPG2P98160 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.92□□□□□ -0.5
HSPG2P98160 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HSPG2P98160 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.92□□□□□ -0.5
HSPG2P98160 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HSPG2P98160 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HSPG2P98160 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
HSPG2P98160 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC11.92□□□□□ -0.5
HSPG2P98160 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HSPG2P98160 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.92□□□□□ -0.5
HSPG2P98160 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HSPG2P98160 MIR3917-201ENST00000580971 93 ntBASIC11.92□□□□□ -0.5
HSPG2P98160 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.92□□□□□ -0.5
HSPG2P98160 FAM215A-202ENST00000632077 792 ntBASIC11.92□□□□□ -0.5
HSPG2P98160 AL024507.2-201ENST00000606070 2574 ntBASIC11.92□□□□□ -0.5
HSPG2P98160 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
HSPG2P98160 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC11.92□□□□□ -0.5
HSPG2P98160 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC11.92□□□□□ -0.5
HSPG2P98160 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
HSPG2P98160 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.92□□□□□ -0.5
HSPG2P98160 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HSPG2P98160 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HSPG2P98160 AC104819.1-201ENST00000504587 486 ntBASIC11.92□□□□□ -0.5
HSPG2P98160 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC11.92□□□□□ -0.5
HSPG2P98160 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HSPG2P98160 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC11.91□□□□□ -0.5
HSPG2P98160 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.91□□□□□ -0.5
HSPG2P98160 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.91□□□□□ -0.5
HSPG2P98160 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC11.91□□□□□ -0.5
HSPG2P98160 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.91□□□□□ -0.5
HSPG2P98160 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC11.91□□□□□ -0.5
HSPG2P98160 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.91□□□□□ -0.5
HSPG2P98160 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
HSPG2P98160 GPAT2P1-201ENST00000444924 1672 ntBASIC11.91□□□□□ -0.5
HSPG2P98160 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC11.91□□□□□ -0.5
HSPG2P98160 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.91□□□□□ -0.5
HSPG2P98160 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HSPG2P98160 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
HSPG2P98160 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.91□□□□□ -0.5
HSPG2P98160 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.91□□□□□ -0.5
HSPG2P98160 AC018712.1-201ENST00000455767 687 ntBASIC11.91□□□□□ -0.5
HSPG2P98160 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC11.91□□□□□ -0.5
HSPG2P98160 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.91□□□□□ -0.5
HSPG2P98160 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms