Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PTPN5P54829 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN5P54829 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPN5P54829 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 AL441883.1-201ENST00000566170 1045 ntBASIC19.87■□□□□ 0.77
PTPN5P54829 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PTPN5P54829 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN5P54829 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.87■□□□□ 0.77
PTPN5P54829 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PTPN5P54829 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN5P54829 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PTPN5P54829 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
PTPN5P54829 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN5P54829 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PTPN5P54829 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PTPN5P54829 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN5P54829 ZNF444P1-201ENST00000559497 298 ntBASIC19.86■□□□□ 0.77
PTPN5P54829 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN5P54829 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PTPN5P54829 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PTPN5P54829 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN5P54829 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
PTPN5P54829 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN5P54829 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN5P54829 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN5P54829 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPN5P54829 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.85■□□□□ 0.77
PTPN5P54829 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN5P54829 AC004980.1-204ENST00000429707 299 ntBASIC19.85■□□□□ 0.77
PTPN5P54829 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.85■□□□□ 0.77
PTPN5P54829 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
PTPN5P54829 AC092119.3-201ENST00000612618 583 ntBASIC19.85■□□□□ 0.77
PTPN5P54829 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
PTPN5P54829 AC117500.6-201ENST00000624871 588 ntBASIC19.85■□□□□ 0.77
PTPN5P54829 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PTPN5P54829 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
PTPN5P54829 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
PTPN5P54829 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPN5P54829 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN5P54829 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PTPN5P54829 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PTPN5P54829 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.84■□□□□ 0.77
PTPN5P54829 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPN5P54829 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.84■□□□□ 0.77
PTPN5P54829 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.84■□□□□ 0.77
PTPN5P54829 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
PTPN5P54829 NPAP1P7-201ENST00000613027 823 ntBASIC19.84■□□□□ 0.77
PTPN5P54829 AL023973.1-201ENST00000624619 620 ntBASIC19.84■□□□□ 0.77
PTPN5P54829 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
PTPN5P54829 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN5P54829 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
PTPN5P54829 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN5P54829 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN5P54829 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.83■□□□□ 0.77
PTPN5P54829 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN5P54829 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PTPN5P54829 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms