Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.04■□□□□ 0.96
HOXC8P31273 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXC8P31273 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.04■□□□□ 0.96
HOXC8P31273 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXC8P31273 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXC8P31273 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.04■□□□□ 0.96
HOXC8P31273 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.03■□□□□ 0.96
HOXC8P31273 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
HOXC8P31273 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC8P31273 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HOXC8P31273 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXC8P31273 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXC8P31273 ZNF444P1-201ENST00000559497 298 ntBASIC21.03■□□□□ 0.96
HOXC8P31273 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.03■□□□□ 0.96
HOXC8P31273 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
HOXC8P31273 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC8P31273 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC8P31273 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC8P31273 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
HOXC8P31273 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HOXC8P31273 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC8P31273 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC8P31273 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.02■□□□□ 0.96
HOXC8P31273 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC8P31273 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC8P31273 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC8P31273 KRT18P56-201ENST00000507275 550 ntBASIC21.02■□□□□ 0.96
HOXC8P31273 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.02■□□□□ 0.96
HOXC8P31273 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.02■□□□□ 0.96
HOXC8P31273 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.02■□□□□ 0.96
HOXC8P31273 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
HOXC8P31273 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
HOXC8P31273 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC8P31273 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.02■□□□□ 0.96
HOXC8P31273 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
HOXC8P31273 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC8P31273 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HOXC8P31273 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HOXC8P31273 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.95
HOXC8P31273 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HOXC8P31273 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.01■□□□□ 0.95
HOXC8P31273 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.01■□□□□ 0.95
HOXC8P31273 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HOXC8P31273 VENTXP5-201ENST00000523979 775 ntBASIC21.01■□□□□ 0.95
HOXC8P31273 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
HOXC8P31273 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.01■□□□□ 0.95
HOXC8P31273 GPAT2P1-201ENST00000444924 1672 ntBASIC21.01■□□□□ 0.95
HOXC8P31273 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HOXC8P31273 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC8P31273 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXC8P31273 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC8P31273 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21■□□□□ 0.95
HOXC8P31273 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC8P31273 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HOXC8P31273 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21■□□□□ 0.95
HOXC8P31273 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXC8P31273 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC8P31273 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21■□□□□ 0.95
HOXC8P31273 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21■□□□□ 0.95
HOXC8P31273 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21■□□□□ 0.95
HOXC8P31273 LINC01006-201ENST00000333319 2292 ntBASIC21■□□□□ 0.95
HOXC8P31273 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
HOXC8P31273 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21■□□□□ 0.95
HOXC8P31273 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC8P31273 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC8P31273 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC8P31273 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC8P31273 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HOXC8P31273 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC8P31273 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC8P31273 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC8P31273 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC8P31273 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC8P31273 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
HOXC8P31273 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC8P31273 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXC8P31273 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.99■□□□□ 0.95
HOXC8P31273 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC8P31273 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC8P31273 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC8P31273 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXC8P31273 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC8P31273 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms