Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RARAP10276 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
RARAP10276 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RARAP10276 AC104417.2-201ENST00000562989 1793 ntBASIC20.18■□□□□ 0.82
RARAP10276 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARAP10276 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.18■□□□□ 0.82
RARAP10276 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARAP10276 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
RARAP10276 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARAP10276 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RARAP10276 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARAP10276 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.18■□□□□ 0.82
RARAP10276 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.18■□□□□ 0.82
RARAP10276 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RARAP10276 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.18■□□□□ 0.82
RARAP10276 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.18■□□□□ 0.82
RARAP10276 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.18■□□□□ 0.82
RARAP10276 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.18■□□□□ 0.82
RARAP10276 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RARAP10276 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARAP10276 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARAP10276 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.18■□□□□ 0.82
RARAP10276 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RARAP10276 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RARAP10276 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RARAP10276 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RARAP10276 NBPF21P-201ENST00000425093 1451 ntBASIC20.18■□□□□ 0.82
RARAP10276 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.18■□□□□ 0.82
RARAP10276 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RARAP10276 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RARAP10276 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
RARAP10276 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.17■□□□□ 0.82
RARAP10276 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RARAP10276 AC006333.2-201ENST00000607957 2099 ntBASIC20.17■□□□□ 0.82
RARAP10276 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.17■□□□□ 0.82
RARAP10276 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.17■□□□□ 0.82
RARAP10276 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RARAP10276 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.17■□□□□ 0.82
RARAP10276 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.17■□□□□ 0.82
RARAP10276 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RARAP10276 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
RARAP10276 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RARAP10276 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RARAP10276 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RARAP10276 SDHAP1-207ENST00000440850 2000 ntBASIC20.16■□□□□ 0.82
RARAP10276 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RARAP10276 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RARAP10276 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RARAP10276 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.16■□□□□ 0.82
RARAP10276 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RARAP10276 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.16■□□□□ 0.82
RARAP10276 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RARAP10276 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RARAP10276 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RARAP10276 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RARAP10276 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RARAP10276 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RARAP10276 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RARAP10276 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.15■□□□□ 0.82
RARAP10276 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RARAP10276 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RARAP10276 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RARAP10276 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RARAP10276 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RARAP10276 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RARAP10276 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RARAP10276 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.15■□□□□ 0.82
RARAP10276 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.15■□□□□ 0.82
RARAP10276 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.15■□□□□ 0.82
RARAP10276 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.15■□□□□ 0.82
RARAP10276 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.15■□□□□ 0.82
RARAP10276 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.15■□□□□ 0.82
RARAP10276 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RARAP10276 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RARAP10276 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
RARAP10276 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.15■□□□□ 0.82
RARAP10276 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RARAP10276 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
RARAP10276 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RARAP10276 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
RARAP10276 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RARAP10276 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RARAP10276 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms