Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT4O95628 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT4O95628 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
CNOT4O95628 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT4O95628 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNOT4O95628 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT4O95628 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT4O95628 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT4O95628 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CNOT4O95628 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CNOT4O95628 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT4O95628 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT4O95628 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT4O95628 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT4O95628 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT4O95628 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT4O95628 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
CNOT4O95628 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.08■□□□□ 0.33
CNOT4O95628 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT4O95628 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.08■□□□□ 0.33
CNOT4O95628 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT4O95628 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT4O95628 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT4O95628 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT4O95628 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.08■□□□□ 0.32
CNOT4O95628 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
CNOT4O95628 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT4O95628 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.08■□□□□ 0.32
CNOT4O95628 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.08■□□□□ 0.32
CNOT4O95628 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CNOT4O95628 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.08■□□□□ 0.32
CNOT4O95628 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.08■□□□□ 0.32
CNOT4O95628 AL160286.2-201ENST00000567150 934 ntBASIC17.08■□□□□ 0.32
CNOT4O95628 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT4O95628 AC012306.2-201ENST00000609350 630 ntBASIC17.08■□□□□ 0.32
CNOT4O95628 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.08■□□□□ 0.32
CNOT4O95628 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.08■□□□□ 0.32
CNOT4O95628 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT4O95628 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT4O95628 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT4O95628 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.08■□□□□ 0.32
CNOT4O95628 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT4O95628 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.08■□□□□ 0.32
CNOT4O95628 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CNOT4O95628 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT4O95628 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CNOT4O95628 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.07■□□□□ 0.32
CNOT4O95628 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 UNC93B2-201ENST00000285383 730 ntBASIC17.07■□□□□ 0.32
CNOT4O95628 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.07■□□□□ 0.32
CNOT4O95628 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CNOT4O95628 REXO1L10P-201ENST00000615707 1290 ntBASIC17.07■□□□□ 0.32
CNOT4O95628 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CNOT4O95628 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT4O95628 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CNOT4O95628 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT4O95628 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CNOT4O95628 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT4O95628 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT4O95628 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT4O95628 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CNOT4O95628 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.06■□□□□ 0.32
CNOT4O95628 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CNOT4O95628 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
CNOT4O95628 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.06■□□□□ 0.32
CNOT4O95628 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT4O95628 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT4O95628 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT4O95628 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.06■□□□□ 0.32
CNOT4O95628 MIR6786-201ENST00000616843 113 ntBASIC17.06■□□□□ 0.32
CNOT4O95628 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.06■□□□□ 0.32
CNOT4O95628 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT4O95628 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CNOT4O95628 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CNOT4O95628 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT4O95628 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT4O95628 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT4O95628 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT4O95628 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT4O95628 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT4O95628 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT4O95628 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT4O95628 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT4O95628 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT4O95628 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CNOT4O95628 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT4O95628 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT4O95628 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT4O95628 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms