Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLDN4O14493 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN4O14493 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN4O14493 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN4O14493 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN4O14493 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLDN4O14493 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN4O14493 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLDN4O14493 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN4O14493 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN4O14493 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN4O14493 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLDN4O14493 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN4O14493 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CLDN4O14493 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN4O14493 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLDN4O14493 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN4O14493 TSPY7P-201ENST00000431358 1114 ntBASIC18.13■□□□□ 0.49
CLDN4O14493 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN4O14493 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN4O14493 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN4O14493 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.13■□□□□ 0.49
CLDN4O14493 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN4O14493 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN4O14493 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN4O14493 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN4O14493 LINC01465-201ENST00000408887 1940 ntBASIC18.13■□□□□ 0.49
CLDN4O14493 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN4O14493 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN4O14493 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN4O14493 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN4O14493 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN4O14493 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CLDN4O14493 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN4O14493 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN4O14493 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN4O14493 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN4O14493 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN4O14493 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN4O14493 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN4O14493 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN4O14493 AC004951.3-201ENST00000418645 1148 ntBASIC18.12■□□□□ 0.49
CLDN4O14493 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN4O14493 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN4O14493 AP003071.4-201ENST00000562276 1284 ntBASIC18.12■□□□□ 0.49
CLDN4O14493 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN4O14493 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.12■□□□□ 0.49
CLDN4O14493 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CLDN4O14493 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN4O14493 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN4O14493 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN4O14493 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN4O14493 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLDN4O14493 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLDN4O14493 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN4O14493 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN4O14493 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CLDN4O14493 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN4O14493 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN4O14493 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN4O14493 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN4O14493 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN4O14493 MIR6786-201ENST00000616843 113 ntBASIC18.11■□□□□ 0.49
CLDN4O14493 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CLDN4O14493 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDN4O14493 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN4O14493 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDN4O14493 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN4O14493 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN4O14493 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN4O14493 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN4O14493 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN4O14493 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.1■□□□□ 0.49
CLDN4O14493 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 RCC2P6-201ENST00000526625 1557 ntBASIC18.1■□□□□ 0.49
CLDN4O14493 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CLDN4O14493 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CLDN4O14493 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLDN4O14493 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN4O14493 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.1■□□□□ 0.49
CLDN4O14493 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.1■□□□□ 0.49
CLDN4O14493 Z85996.1-201ENST00000494644 937 ntBASIC18.1■□□□□ 0.49
CLDN4O14493 AC116562.2-201ENST00000507042 360 ntBASIC18.1■□□□□ 0.49
CLDN4O14493 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN4O14493 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN4O14493 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN4O14493 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN4O14493 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms