Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.64■□□□□ 0.89
LCHNA4D1U4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCHNA4D1U4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCHNA4D1U4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCHNA4D1U4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LCHNA4D1U4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCHNA4D1U4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.63■□□□□ 0.89
LCHNA4D1U4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.63■□□□□ 0.89
LCHNA4D1U4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCHNA4D1U4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.63■□□□□ 0.89
LCHNA4D1U4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCHNA4D1U4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LCHNA4D1U4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCHNA4D1U4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.63■□□□□ 0.89
LCHNA4D1U4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCHNA4D1U4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LCHNA4D1U4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCHNA4D1U4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCHNA4D1U4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LCHNA4D1U4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LCHNA4D1U4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCHNA4D1U4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LCHNA4D1U4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 MIR3180-1-201ENST00000580374 94 ntBASIC20.62■□□□□ 0.89
LCHNA4D1U4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 MIR3180-3-201ENST00000584616 94 ntBASIC20.62■□□□□ 0.89
LCHNA4D1U4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LCHNA4D1U4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LCHNA4D1U4 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.62■□□□□ 0.89
LCHNA4D1U4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCHNA4D1U4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCHNA4D1U4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LCHNA4D1U4 KRT8P10-201ENST00000450021 1447 ntBASIC20.61■□□□□ 0.89
LCHNA4D1U4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCHNA4D1U4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCHNA4D1U4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCHNA4D1U4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 AC111152.3-201ENST00000569699 673 ntBASIC20.61■□□□□ 0.89
LCHNA4D1U4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCHNA4D1U4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCHNA4D1U4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LCHNA4D1U4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCHNA4D1U4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCHNA4D1U4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCHNA4D1U4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.61■□□□□ 0.89
LCHNA4D1U4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LCHNA4D1U4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCHNA4D1U4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.6■□□□□ 0.89
LCHNA4D1U4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LCHNA4D1U4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.6■□□□□ 0.89
LCHNA4D1U4 AP001271.2-201ENST00000624018 1556 ntBASIC20.6■□□□□ 0.89
LCHNA4D1U4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.6■□□□□ 0.89
LCHNA4D1U4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
LCHNA4D1U4 AC004870.1-201ENST00000315132 882 ntBASIC20.6■□□□□ 0.89
LCHNA4D1U4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.6■□□□□ 0.89
LCHNA4D1U4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.6■□□□□ 0.89
LCHNA4D1U4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LCHNA4D1U4 TSSC2-201ENST00000450217 709 ntBASIC20.6■□□□□ 0.89
LCHNA4D1U4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCHNA4D1U4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCHNA4D1U4 CR769767.2-201ENST00000622735 460 ntBASIC20.6■□□□□ 0.89
LCHNA4D1U4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCHNA4D1U4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCHNA4D1U4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.6■□□□□ 0.89
LCHNA4D1U4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LCHNA4D1U4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.6■□□□□ 0.89
LCHNA4D1U4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LCHNA4D1U4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCHNA4D1U4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.59■□□□□ 0.89
LCHNA4D1U4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCHNA4D1U4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCHNA4D1U4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LCHNA4D1U4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.59■□□□□ 0.89
LCHNA4D1U4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.59■□□□□ 0.89
LCHNA4D1U4 KRT17P6-201ENST00000453795 1220 ntBASIC20.59■□□□□ 0.89
LCHNA4D1U4 RASA4DP-201ENST00000460726 1199 ntBASIC20.59■□□□□ 0.89
LCHNA4D1U4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.59■□□□□ 0.89
LCHNA4D1U4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LCHNA4D1U4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms