Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 AL512408.1-201ENST00000569378 2000 ntBASIC22.48■■□□□ 1.19
SSC5DA1L4H1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SSC5DA1L4H1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 KRT17P6-201ENST00000453795 1220 ntBASIC22.47■■□□□ 1.19
SSC5DA1L4H1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 AC011498.5-201ENST00000592027 486 ntBASIC22.47■■□□□ 1.19
SSC5DA1L4H1 AC079602.3-201ENST00000623931 403 ntBASIC22.47■■□□□ 1.19
SSC5DA1L4H1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.47■■□□□ 1.19
SSC5DA1L4H1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 AC034232.1-201ENST00000506026 1064 ntBASIC22.46■■□□□ 1.19
SSC5DA1L4H1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 IFNL4P1-201ENST00000607083 540 ntBASIC22.46■■□□□ 1.19
SSC5DA1L4H1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SSC5DA1L4H1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
SSC5DA1L4H1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SSC5DA1L4H1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
SSC5DA1L4H1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 AP002414.4-201ENST00000589764 1148 ntBASIC22.45■■□□□ 1.18
SSC5DA1L4H1 AL121672.3-201ENST00000608644 468 ntBASIC22.45■■□□□ 1.18
SSC5DA1L4H1 AC024243.1-201ENST00000609234 778 ntBASIC22.45■■□□□ 1.18
SSC5DA1L4H1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.45■■□□□ 1.18
SSC5DA1L4H1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 AC004870.1-201ENST00000315132 882 ntBASIC22.44■■□□□ 1.18
SSC5DA1L4H1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 SEC1P-202ENST00000473944 940 ntBASIC22.44■■□□□ 1.18
SSC5DA1L4H1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 AC093525.10-201ENST00000625130 1569 ntBASIC22.44■■□□□ 1.18
SSC5DA1L4H1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SSC5DA1L4H1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SSC5DA1L4H1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SSC5DA1L4H1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SSC5DA1L4H1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SSC5DA1L4H1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
SSC5DA1L4H1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC22.43■■□□□ 1.18
SSC5DA1L4H1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SSC5DA1L4H1 BX276092.5-203ENST00000456199 560 ntBASIC22.43■■□□□ 1.18
SSC5DA1L4H1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms