Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 TRIM60P18-201ENST00000441518 828 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 HMGN2P21-201ENST00000447764 270 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 MTND1P29-201ENST00000448112 647 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 MTND1P9-201ENST00000453775 944 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 snoU13.1-201ENST00000459157 104 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 MTND4LP3-201ENST00000468320 276 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 OR51K1P-201ENST00000510214 950 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 AC007016.1-201ENST00000512110 244 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 MTND4LP18-201ENST00000526864 291 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 AL121603.1-201ENST00000553815 142 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 AC012182.1-201ENST00000570133 895 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 MIR5096-201ENST00000583713 70 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 SNRPGP15-201ENST00000600149 222 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 SNORD91B-202ENST00000608459 222 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 A2MP1-204ENST00000566278 4130 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL4A3BPQ9Y5P4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AL121657.1-201ENST00000327215 531 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 MTCYBP36-201ENST00000404146 440 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 PGBD4P8-201ENST00000412993 562 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 RPL36AP36-201ENST00000418616 301 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AL732292.1-201ENST00000426692 226 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 RPL23AP1-201ENST00000428990 471 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AC096638.2-201ENST00000434965 711 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AC112653.1-201ENST00000443851 386 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 FAM103A2P-201ENST00000444122 354 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 SNRPGP9-201ENST00000456025 225 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 RPS20P32-201ENST00000456044 356 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AP1S2P1-201ENST00000457344 379 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AC104763.1-201ENST00000475274 360 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AC091965.2-201ENST00000512324 613 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AC135279.1-201ENST00000543493 504 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 AL133243.1-201ENST00000614487 366 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL4A3BPQ9Y5P4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 U3.4-201ENST00000363352 213 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 Y_RNA.201-201ENST00000364052 96 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 RNY3P10-201ENST00000384764 102 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 MIR129-1-201ENST00000384972 72 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 U3.20-201ENST00000390909 217 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 Z74021.1-201ENST00000423610 407 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 BX119904.4-201ENST00000424402 301 ntBASIC5.13□□□□□ -1.59
COL4A3BPQ9Y5P4 AL445669.1-201ENST00000426743 755 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms