Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC008162.1-201ENST00000604718 254 ntBASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 AL670379.1-201ENST00000604752 252 ntBASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 AL451044.1-201ENST00000604867 238 ntBASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 AL670379.5-201ENST00000605253 252 ntBASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 AL670379.8-201ENST00000605353 252 ntBASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 AL670379.7-201ENST00000605823 252 ntBASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 AC005225.5-201ENST00000623547 2225 ntBASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHB11Q9Y5F2 SAGE4P-201ENST00000442271 3381 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 SNORD62.1-201ENST00000362541 86 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 SNORA51.1-201ENST00000363243 140 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 RNA5SP346-201ENST00000363541 121 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 Y_RNA.288-201ENST00000364854 92 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 RN7SKP69-201ENST00000365390 305 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 SNORA51.9-201ENST00000384295 124 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 RNU6-393P-201ENST00000384475 107 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 RNU6-754P-201ENST00000391166 107 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 U3.25-201ENST00000391209 220 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC016027.5-201ENST00000427227 210 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AL360081.1-201ENST00000428299 555 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 PPIAP10-201ENST00000438675 458 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 EEF1A1P1-201ENST00000447052 739 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC112492.4-201ENST00000456549 352 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC025458.1-201ENST00000506046 166 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC016065.2-201ENST00000514530 444 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 RNA5SP384-201ENST00000516615 116 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC022616.4-201ENST00000522985 181 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC079600.1-201ENST00000550326 297 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 OR4H6P-201ENST00000563771 921 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC011494.1-201ENST00000596454 237 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AC016727.2-201ENST00000603988 621 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AP001823.1-201ENST00000604056 1003 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 SNORD58B-201ENST00000607313 66 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AL606534.2-204ENST00000635008 178 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AL031119.1-201ENST00000404707 1879 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 AL606537.1-201ENST00000607258 2011 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 SHQ1P1-201ENST00000437111 1544 ntBASIC6.04□□□□□ -1.44
PCDHB11Q9Y5F2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 MAPK10-261ENST00000641050 3109 ntBASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 Y_RNA.39-201ENST00000362620 98 ntBASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 RNU1-49P-201ENST00000363468 159 ntBASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 RNU6-946P-201ENST00000383878 107 ntBASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 SNORA70.9-201ENST00000384370 135 ntBASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 Y_RNA.485-201ENST00000384395 102 ntBASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 SNORA17A-201ENST00000391185 133 ntBASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PCDHB11Q9Y5F2 RNA5SP178-201ENST00000410380 128 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms