Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 OR9N1P-202ENST00000494289 481 ntBASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 UBE2NP1-201ENST00000545592 458 ntBASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 AC005476.1-201ENST00000554427 397 ntBASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 AC135507.2-201ENST00000612443 309 ntBASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 MIR8057-201ENST00000620957 69 ntBASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 AC007496.3-201ENST00000624987 3443 ntBASIC3.96□□□□□ -1.78
CTNNA3Q9UI47 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 GNG5P1-201ENST00000255500 204 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 MIR128-1-201ENST00000384921 82 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 U3.26-201ENST00000391236 204 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AL589655.1-201ENST00000405398 482 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 RNU2-71P-201ENST00000411395 189 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 HMGN1P24-201ENST00000412282 298 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 MTCYBP24-201ENST00000420387 1106 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AC236972.1-201ENST00000433225 199 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AL591503.2-201ENST00000442314 1005 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AC092754.2-201ENST00000463506 460 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AL049873.1-201ENST00000480540 376 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 HMGB1P38-201ENST00000490557 577 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AC068657.1-201ENST00000520807 306 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AC010306.1-201ENST00000523223 1117 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AC024224.1-201ENST00000538284 609 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AL009028.1-201ENST00000604895 802 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AL513477.2-201ENST00000607858 568 ntBASIC3.95□□□□□ -1.78
CTNNA3Q9UI47 AL021368.2-201ENST00000606125 5352 ntBASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 BX890604.2-201ENST00000427883 474 ntBASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 AC005326.1-201ENST00000429197 123 ntBASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 HMGN2P16-201ENST00000456802 261 ntBASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 AC008155.2-201ENST00000464337 397 ntBASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 AL442163.2-201ENST00000553912 710 ntBASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 AC090312.2-201ENST00000582687 378 ntBASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 AC011374.2-201ENST00000607135 526 ntBASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 MTND5P27-201ENST00000428871 1720 ntBASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTNNA3Q9UI47 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 RPL23AP47-201ENST00000408017 460 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 RPF2P1-201ENST00000424137 906 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 RPL21P66-201ENST00000426566 466 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC115115.1-201ENST00000449927 248 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AP001486.1-201ENST00000463339 476 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 RPL7P38-201ENST00000488396 739 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC114967.1-201ENST00000504890 259 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC016065.2-201ENST00000514530 444 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 RNA5SP380-201ENST00000517190 98 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AL162713.1-201ENST00000604480 262 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 IGHV3-29-201ENST00000604817 344 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC079610.2-201ENST00000604818 690 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 YPEL5P2-201ENST00000605553 359 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AC073657.2-201ENST00000605661 303 ntBASIC3.93□□□□□ -1.78
CTNNA3Q9UI47 AL157817.1-201ENST00000614264 790 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms