Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 IFNWP4-201ENST00000453148 294 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AP1S2P1-201ENST00000457344 379 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AP000942.1-201ENST00000463969 747 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AC008628.2-201ENST00000502605 298 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AC093677.1-201ENST00000514414 678 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 RNA5SP43-201ENST00000516559 110 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 Vault.3-201ENST00000516676 95 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AC104383.1-201ENST00000530297 370 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 BNIP3P1-201ENST00000547295 580 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 CBX3P5-201ENST00000552017 521 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 MIR4512-201ENST00000583257 77 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 C8orf59P2-201ENST00000603441 271 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AC005191.1-201ENST00000603950 358 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AL445222.1-201ENST00000607259 628 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AC009159.1-201ENST00000618386 642 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 BX005214.3-202ENST00000619809 325 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AC009268.2-201ENST00000621925 457 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AC004009.2-201ENST00000623016 728 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AL732618.1-201ENST00000623251 301 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 AC006065.6-201ENST00000625201 545 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.19□□□□□ -1.58
PPARGC1AQ9UBK2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AP001642.1-201ENST00000624727 2117 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 SCARNA15-201ENST00000607520 4325 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 PCAT14-202ENST00000627127 3935 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC017104.4-201ENST00000636283 1592 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 RNU6-1322P-201ENST00000364309 107 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 RNA5SP428-201ENST00000365129 132 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 RNA5SP455-201ENST00000365190 119 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 GJA6P-201ENST00000415117 1042 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 RPL34P6-201ENST00000432390 345 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 RHOT1P3-201ENST00000436571 331 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AL450023.3-201ENST00000440592 271 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 HMGB3P9-201ENST00000441799 583 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC004453.1-201ENST00000487895 408 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC079382.1-201ENST00000493346 557 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 RNU6-507P-201ENST00000516045 100 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 RNU6-875P-201ENST00000516488 106 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AF235103.2-201ENST00000525753 346 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AL359212.1-201ENST00000556608 614 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC044860.2-201ENST00000561005 179 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC053481.3-201ENST00000577881 843 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AP005119.2-201ENST00000579735 1105 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AL009028.1-201ENST00000604895 802 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC211433.2-201ENST00000608433 387 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 MIR6864-201ENST00000617935 70 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC139792.3-201ENST00000623525 224 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 SAGE4P-201ENST00000442271 3381 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AC130650.2-201ENST00000618736 2403 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 KPNA2P2-201ENST00000419546 1489 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.18□□□□□ -1.58
PPARGC1AQ9UBK2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PPARGC1AQ9UBK2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PPARGC1AQ9UBK2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PPARGC1AQ9UBK2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PPARGC1AQ9UBK2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms