Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 OR5H5P-201ENST00000503164 928 ntBASIC3.52□□□□□ -1.85
PHRF1Q9P1Y6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 SNORA36C-201ENST00000384289 132 ntBASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 SNORA70E-201ENST00000384492 135 ntBASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 RNA5SP247-201ENST00000411181 105 ntBASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 AL591806.2-201ENST00000433122 173 ntBASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 RPS4XP6-201ENST00000477670 797 ntBASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 PRELID3BP7-201ENST00000503606 469 ntBASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 MIR3605-201ENST00000583214 100 ntBASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 AC008277.2-201ENST00000605196 797 ntBASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 AC005046.1-201ENST00000608515 625 ntBASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 AC099063.3-201ENST00000642066 185 ntBASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.51□□□□□ -1.85
PHRF1Q9P1Y6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 MTCO1P39-201ENST00000426148 480 ntBASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 RNU7-170P-201ENST00000459303 61 ntBASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 HPRT1P3-201ENST00000539521 576 ntBASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 AC103810.6-201ENST00000606708 136 ntBASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 AL354950.1-201ENST00000614150 568 ntBASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 AC131238.1-201ENST00000617135 328 ntBASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 ZNF542P-204ENST00000482727 1305 ntBASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
PHRF1Q9P1Y6 PTP4A1P5-201ENST00000420305 455 ntBASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 AL590103.1-201ENST00000434488 307 ntBASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 RPL7P12-201ENST00000446719 750 ntBASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 DEFB122-202ENST00000569013 197 ntBASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 AC078899.3-201ENST00000599065 212 ntBASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 AC025811.1-201ENST00000604312 472 ntBASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 AC026523.2-201ENST00000625039 7739 ntBASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PHRF1Q9P1Y6 AC006020.1-201ENST00000420179 1854 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 RNVU1-3-201ENST00000364313 161 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 Z98742.3-201ENST00000418637 326 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 HMGB3P12-201ENST00000438745 556 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AL592437.1-201ENST00000443781 492 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AC015712.3-201ENST00000559380 164 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AC103798.2-201ENST00000624292 632 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AC093311.1-201ENST00000506586 2021 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 MIR148B-201ENST00000362252 99 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 RNU6-618P-201ENST00000363518 112 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 Y_RNA.238-201ENST00000364441 102 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 RPS20P5-201ENST00000434808 360 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AC008716.1-201ENST00000511084 513 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AGGF1P8-201ENST00000562979 1000 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 AL020991.1-201ENST00000612314 373 ntBASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.48□□□□□ -1.85
PHRF1Q9P1Y6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 MTCO1P9-201ENST00000505577 1534 ntBASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 RNU1-100P-201ENST00000365255 165 ntBASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 ATP5F1P6-201ENST00000402768 767 ntBASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 AL137014.1-201ENST00000420490 1226 ntBASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 NANOGP5-201ENST00000424456 877 ntBASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 HMGN2P3-201ENST00000433603 273 ntBASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 HMGN2P5-201ENST00000436882 273 ntBASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 AC092013.1-201ENST00000438795 332 ntBASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 RPS26P24-201ENST00000497656 331 ntBASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 AC100870.1-201ENST00000522035 505 ntBASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 AC019227.1-201ENST00000526902 510 ntBASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.47□□□□□ -1.85
PHRF1Q9P1Y6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms