Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RPL7L1P13-201ENST00000511702 739 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AP001317.1-201ENST00000531194 960 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC008011.1-201ENST00000545989 227 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC010198.2-201ENST00000550612 259 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC022662.1-201ENST00000580252 331 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC011477.5-201ENST00000586571 259 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AL592436.1-201ENST00000605135 558 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 Z99129.2-201ENST00000619967 314 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 LARP1BP1-201ENST00000506036 1359 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NDE1Q9NXR1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NDE1Q9NXR1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NDE1Q9NXR1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AP001148.1-201ENST00000624124 2359 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 FAM133CP-201ENST00000332869 704 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 RNU6-1151P-201ENST00000384684 107 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 PRRC2CP1-201ENST00000404428 159 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AL133264.1-201ENST00000407157 562 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 RNA5SP80-201ENST00000410475 111 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 RNU2-37P-201ENST00000410695 177 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 RNU2-42P-201ENST00000410697 113 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 RN7SKP33-201ENST00000410942 340 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 MTND4P22-201ENST00000413116 1169 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AL049610.1-201ENST00000423374 372 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 BX679664.1-201ENST00000434429 253 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 RPS29P33-201ENST00000456717 146 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 RPS15AP1-201ENST00000457423 391 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 NF1P3-201ENST00000457709 450 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC104689.1-201ENST00000473356 768 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AP000893.1-201ENST00000474462 794 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC108734.3-201ENST00000481241 1165 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AP000563.1-201ENST00000490865 758 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC116353.3-201ENST00000511215 249 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 SNORA3.4-201ENST00000515969 96 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 RNU5A-4P-201ENST00000516588 111 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC022790.1-201ENST00000522872 204 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 MRPS36P5-201ENST00000551909 298 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AL354943.1-201ENST00000572103 781 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC069545.1-201ENST00000605671 358 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AC019193.2-201ENST00000610012 634 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AP003072.4-201ENST00000624580 310 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 AL513302.2-201ENST00000562313 1842 ntBASIC3.58□□□□□ -1.84
NDE1Q9NXR1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
NDE1Q9NXR1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 USP8P1-201ENST00000494673 3183 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.57□□□□□ -1.84
NDE1Q9NXR1 RNU1-75P-201ENST00000347264 129 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 SNORD113-6-201ENST00000363345 75 ntBASIC3.57□□□□□ -1.84
NDE1Q9NXR1 Y_RNA.169-201ENST00000363745 96 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms