Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RPL21P10-201ENST00000463521 490 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 ARL2BPP6-201ENST00000512757 439 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 SNORA31.20-201ENST00000517111 133 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 OR4A45P-201ENST00000529954 901 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AL121766.1-201ENST00000547436 487 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AL390240.1-201ENST00000612950 384 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AC069209.1-201ENST00000619282 651 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 HPVC1-201ENST00000629899 1198 ntBASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.59□□□□□ -1.83
TM9SF3Q9HD45 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TM9SF3Q9HD45 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TM9SF3Q9HD45 RIOK3P1-201ENST00000418778 1528 ntBASIC3.59□□□□□ -1.84
TM9SF3Q9HD45 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TM9SF3Q9HD45 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AL589826.1-201ENST00000340697 249 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 RNU6-263P-201ENST00000363811 107 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 MIR184-201ENST00000384962 84 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 RNA5SP56-201ENST00000410277 118 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 Z92545.1-201ENST00000411782 234 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 RAD23BP2-201ENST00000416003 1207 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AC114973.1-201ENST00000429057 632 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 ATP5JP1-201ENST00000431631 322 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 CYCSP32-201ENST00000440548 321 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AP000563.1-201ENST00000490865 758 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AC004062.1-201ENST00000509926 645 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 SCARNA13-201ENST00000516672 275 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 HIGD1AP6-201ENST00000521833 279 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 IGHV3-76-201ENST00000522465 295 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 PDCL2P2-201ENST00000533651 189 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 OR8K4P-201ENST00000534608 872 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AC012254.4-201ENST00000588843 273 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AC022146.1-201ENST00000595307 847 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AL365503.1-201ENST00000605247 905 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 AC073055.1-201ENST00000456901 1621 ntBASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TM9SF3Q9HD45 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 MOB1AP1-201ENST00000430903 535 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 RPS29P31-201ENST00000446147 164 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 RPL26P28-201ENST00000451325 435 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 RPS15AP1-201ENST00000457423 391 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 ARPC3P2-201ENST00000457786 533 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 snoU13.4-201ENST00000458916 104 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 RN7SKP60-201ENST00000516985 239 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC019227.1-201ENST00000526902 510 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AL139174.1-201ENST00000531489 886 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC011611.1-201ENST00000552179 197 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms