Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC092634.6-201ENST00000418558 192 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC027644.1-201ENST00000419595 298 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 MTCYBP15-201ENST00000433123 1127 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 HIGD1AP11-201ENST00000438361 280 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 MTCYBP34-201ENST00000439552 670 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC125238.1-201ENST00000448842 249 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 HMGB3P8-201ENST00000449709 577 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AL445669.2-201ENST00000454425 421 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 ARPC3P2-201ENST00000457786 533 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 RPS23P3-201ENST00000470993 430 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC009643.1-201ENST00000532030 391 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC008127.2-201ENST00000549925 1075 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC126177.3-201ENST00000551839 688 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AL136520.1-202ENST00000555494 763 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC107982.3-201ENST00000584957 985 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC005776.1-201ENST00000603164 290 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC124312.4-201ENST00000605533 310 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC011816.2-201ENST00000607089 556 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AL023583.1-201ENST00000607518 1143 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC008759.3-201ENST00000613300 508 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC015967.1-201ENST00000619893 476 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC022149.2-201ENST00000621061 203 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AL732618.1-201ENST00000623251 301 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AP000553.6-201ENST00000641242 118 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 ZNF542P-204ENST00000482727 1305 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 AC007496.3-201ENST00000624987 3443 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.39□□□□□ -2.03
SND1-IT1Q9HBX3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 OR5H2-201ENST00000355273 945 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 RNA5SP383-201ENST00000362934 120 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 SNORA58B-201ENST00000364259 136 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 RNU6-1074P-201ENST00000383995 104 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 MIR217-201ENST00000384817 110 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 EI24P2-201ENST00000397776 1076 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 RPS3AP26-201ENST00000398259 784 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 RPL21P65-201ENST00000406094 466 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AC017079.2-201ENST00000416102 485 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 MTCO2P1-201ENST00000424648 477 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 SNRPEP4-201ENST00000435815 279 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 FTH1P1-201ENST00000437933 532 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 RPL12P26-201ENST00000452430 487 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 HMGN1P18-201ENST00000457642 277 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 RPS27P29-201ENST00000463110 252 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 RPL23AP67-201ENST00000465341 474 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 RPL21P18-201ENST00000469899 480 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AC084024.2-201ENST00000503480 791 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AC021146.5-201ENST00000503544 545 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 SNORA31.9-201ENST00000516429 84 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 MRPL49P2-201ENST00000521066 465 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AP001317.1-201ENST00000531194 960 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AP000619.3-201ENST00000535634 1127 ntBASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.38□□□□□ -2.03
SND1-IT1Q9HBX3 AC006518.1-201ENST00000541449 943 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms