Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.28□□□□□ -1.88
LHX5Q9H2C1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.28□□□□□ -1.88
LHX5Q9H2C1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.28□□□□□ -1.88
LHX5Q9H2C1 AC105227.2-201ENST00000615075 605 ntBASIC3.28□□□□□ -1.88
LHX5Q9H2C1 AC099506.2-201ENST00000623074 221 ntBASIC3.28□□□□□ -1.88
LHX5Q9H2C1 AC092184.1-201ENST00000625042 715 ntBASIC3.28□□□□□ -1.88
LHX5Q9H2C1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LHX5Q9H2C1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
LHX5Q9H2C1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 MIR422A-201ENST00000362286 90 ntBASIC3.27□□□□□ -1.89
LHX5Q9H2C1 Y_RNA.111-201ENST00000363248 100 ntBASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AL160175.1-201ENST00000428124 247 ntBASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AC016696.1-201ENST00000446949 318 ntBASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 MTND3P6-201ENST00000485242 339 ntBASIC3.27□□□□□ -1.89
LHX5Q9H2C1 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AC093278.1-201ENST00000494700 600 ntBASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AC074029.2-201ENST00000551045 634 ntBASIC3.27□□□□□ -1.89
LHX5Q9H2C1 MTATP6P25-201ENST00000574491 261 ntBASIC3.27□□□□□ -1.89
LHX5Q9H2C1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
LHX5Q9H2C1 AL035425.3-201ENST00000564206 4996 ntBASIC3.27□□□□□ -1.89
LHX5Q9H2C1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 OR5BR1P-201ENST00000524992 1330 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 MIR148B-201ENST00000362252 99 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 SNORA46-201ENST00000384762 135 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AL583834.1-201ENST00000406943 343 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 RPL31P2-201ENST00000413849 377 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 RSL24D1P3-201ENST00000449255 495 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AP002345.1-201ENST00000456493 928 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 RNU6-775P-201ENST00000459318 96 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 RPS27P29-201ENST00000463110 252 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AC021146.5-201ENST00000503544 545 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 TMEM248P1-201ENST00000510579 951 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 HMGB1P47-201ENST00000511281 589 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 PTGES3P3-201ENST00000511479 482 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 RNU6-751P-201ENST00000516382 101 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 RNU1-103P-201ENST00000516502 125 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AC104997.1-201ENST00000519761 717 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AC245166.1-201ENST00000521012 253 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 ZNF92P3-201ENST00000596594 954 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AC079791.1-201ENST00000605356 973 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AL451074.6-201ENST00000608512 729 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AC121761.2-201ENST00000617300 689 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 SCARNA15.3-201ENST00000626315 122 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 SCARNA4.1-201ENST00000628597 123 ntBASIC3.26□□□□□ -1.89
LHX5Q9H2C1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
LHX5Q9H2C1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 RNU6-152P-201ENST00000384037 107 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 MIR7-1-201ENST00000384871 110 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 MIR153-1-201ENST00000384914 90 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 AL138885.1-201ENST00000405921 675 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 RPL23AP47-201ENST00000408017 460 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 RAD1P2-201ENST00000446414 663 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 RPL37P6-202ENST00000464216 403 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 S100A11P2-201ENST00000467589 312 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 AC107398.1-201ENST00000486904 505 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 RN7SL20P-201ENST00000488827 297 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 AC098799.1-201ENST00000504752 800 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 IGKV2-36-201ENST00000519999 223 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 AL451007.1-201ENST00000595491 289 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 AP004607.9-201ENST00000618202 316 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 AC004972.1-201ENST00000623934 2209 ntBASIC3.25□□□□□ -1.89
LHX5Q9H2C1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LHX5Q9H2C1 FAM35CP-201ENST00000554755 2470 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms