Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC123904.2-201ENST00000548059 300 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AL121821.2-201ENST00000556081 394 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 BBIP1P1-201ENST00000602999 279 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 OR10AB1P-201ENST00000609613 938 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC090510.2-201ENST00000617465 629 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC005858.4-201ENST00000623191 700 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AL731532.2-201ENST00000623542 1953 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC104260.2-201ENST00000623551 3497 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 RPL23P2-201ENST00000320371 421 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 RNU6-744P-201ENST00000365557 107 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 RNU6-1316P-201ENST00000384242 108 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AL645927.1-201ENST00000396783 406 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 HSPA8P15-201ENST00000401676 786 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AL122016.1-201ENST00000403365 367 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 RAB28P1-201ENST00000411517 641 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC078974.1-201ENST00000411597 223 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 RPL23AP27-201ENST00000415161 451 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 PPIAP13-201ENST00000434706 478 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 MRPL50P4-201ENST00000446432 475 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 RN7SL329P-201ENST00000467740 299 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 RN7SL222P-201ENST00000476452 299 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 RPS18P6-201ENST00000476880 458 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AP001025.2-201ENST00000490908 477 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 EIF4A2P5-201ENST00000529914 499 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 PDCD5P1-201ENST00000543528 309 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC127381.1-201ENST00000555979 939 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 RN7SL435P-201ENST00000584418 282 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC243960.4-201ENST00000600532 288 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC007687.1-201ENST00000602704 304 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 RPL26P30-202ENST00000602923 645 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AL121612.2-201ENST00000612261 482 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC015914.2-201ENST00000618167 288 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 MIR1302-1-201ENST00000637932 143 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 AC092162.3-201ENST00000624511 1624 ntBASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXP3Q9BZS1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 RNA5SP183-201ENST00000362452 119 ntBASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
FOXP3Q9BZS1 ARF4P3-201ENST00000397387 509 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms