Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AP000238.1-201ENST00000608759 426 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 Z82243.1-201ENST00000609432 473 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AL136097.3-201ENST00000611097 505 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AL591516.1-201ENST00000611326 274 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 MIR6809-201ENST00000612189 116 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 ATP5A1P2-202ENST00000616464 443 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AL590808.1-201ENST00000618696 141 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AC024884.1-201ENST00000620583 399 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AL136164.4-201ENST00000625013 2135 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AP001052.1-201ENST00000626421 99 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AL132640.3-201ENST00000630473 177 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 RBMY1HP-201ENST00000382759 1389 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 AC010624.4-201ENST00000597606 1351 ntBASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-3Q9BYR4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 MAPK10-344ENST00000641718 3746 ntBASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 AL161901.1-201ENST00000624954 3425 ntBASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 CYP2G2P-201ENST00000594920 1485 ntBASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU6-766P-201ENST00000362478 107 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms