Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.09□□□□□ -1.75
SCAPERQ9BY12 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SCAPERQ9BY12 MIR592-201ENST00000384959 97 ntBASIC4.09□□□□□ -1.75
SCAPERQ9BY12 MIR764-201ENST00000390811 85 ntBASIC4.09□□□□□ -1.75
SCAPERQ9BY12 AC245054.2-201ENST00000415639 319 ntBASIC4.09□□□□□ -1.75
SCAPERQ9BY12 RPL7P10-201ENST00000417407 739 ntBASIC4.09□□□□□ -1.75
SCAPERQ9BY12 AL513043.1-201ENST00000439124 535 ntBASIC4.09□□□□□ -1.75
SCAPERQ9BY12 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.09□□□□□ -1.75
SCAPERQ9BY12 AC093278.1-201ENST00000494700 600 ntBASIC4.09□□□□□ -1.75
SCAPERQ9BY12 AC118282.1-201ENST00000506408 765 ntBASIC4.09□□□□□ -1.75
SCAPERQ9BY12 AC119751.1-201ENST00000513357 765 ntBASIC4.09□□□□□ -1.75
SCAPERQ9BY12 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.09□□□□□ -1.75
SCAPERQ9BY12 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.09□□□□□ -1.75
SCAPERQ9BY12 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.09□□□□□ -1.75
SCAPERQ9BY12 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SCAPERQ9BY12 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SCAPERQ9BY12 SNORA36C-201ENST00000384289 132 ntBASIC4.08□□□□□ -1.76
SCAPERQ9BY12 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.08□□□□□ -1.76
SCAPERQ9BY12 snoU13.23-201ENST00000458863 104 ntBASIC4.08□□□□□ -1.76
SCAPERQ9BY12 AC003982.1-202ENST00000469928 248 ntBASIC4.08□□□□□ -1.76
SCAPERQ9BY12 AC078785.3-201ENST00000476607 425 ntBASIC4.08□□□□□ -1.76
SCAPERQ9BY12 AC008837.1-201ENST00000511513 412 ntBASIC4.08□□□□□ -1.76
SCAPERQ9BY12 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.08□□□□□ -1.76
SCAPERQ9BY12 OR10AB1P-202ENST00000641219 1686 ntBASIC4.08□□□□□ -1.76
SCAPERQ9BY12 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.08□□□□□ -1.76
SCAPERQ9BY12 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCAPERQ9BY12 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCAPERQ9BY12 SNORD6-201ENST00000365444 73 ntBASIC4.07□□□□□ -1.76
SCAPERQ9BY12 MIR512-1-201ENST00000384913 84 ntBASIC4.07□□□□□ -1.76
SCAPERQ9BY12 RPS20P22-201ENST00000473700 357 ntBASIC4.07□□□□□ -1.76
SCAPERQ9BY12 KCTD9P5-201ENST00000504141 1170 ntBASIC4.07□□□□□ -1.76
SCAPERQ9BY12 RNA5SP320-201ENST00000516263 124 ntBASIC4.07□□□□□ -1.76
SCAPERQ9BY12 AC090312.2-201ENST00000582687 378 ntBASIC4.07□□□□□ -1.76
SCAPERQ9BY12 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.07□□□□□ -1.76
SCAPERQ9BY12 MAPK10-362ENST00000641864 4484 ntBASIC4.06□□□□□ -1.76
SCAPERQ9BY12 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCAPERQ9BY12 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCAPERQ9BY12 MIR148B-201ENST00000362252 99 ntBASIC4.06□□□□□ -1.76
SCAPERQ9BY12 RNU1-35P-201ENST00000362782 153 ntBASIC4.06□□□□□ -1.76
SCAPERQ9BY12 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCAPERQ9BY12 RAP1BP1-201ENST00000412709 553 ntBASIC4.06□□□□□ -1.76
SCAPERQ9BY12 Z98742.3-201ENST00000418637 326 ntBASIC4.06□□□□□ -1.76
SCAPERQ9BY12 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.06□□□□□ -1.76
SCAPERQ9BY12 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.06□□□□□ -1.76
SCAPERQ9BY12 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.06□□□□□ -1.76
SCAPERQ9BY12 AL355493.4-201ENST00000618530 292 ntBASIC4.06□□□□□ -1.76
SCAPERQ9BY12 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.06□□□□□ -1.76
SCAPERQ9BY12 MTND5P27-201ENST00000428871 1720 ntBASIC4.06□□□□□ -1.76
SCAPERQ9BY12 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCAPERQ9BY12 AC007336.1-201ENST00000576365 3828 ntBASIC4.06□□□□□ -1.76
SCAPERQ9BY12 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCAPERQ9BY12 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCAPERQ9BY12 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCAPERQ9BY12 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCAPERQ9BY12 AC092326.2-201ENST00000624772 1561 ntBASIC4.06□□□□□ -1.76
SCAPERQ9BY12 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SCAPERQ9BY12 MIR518C-201ENST00000384822 101 ntBASIC4.05□□□□□ -1.76
SCAPERQ9BY12 AC069218.2-201ENST00000411665 344 ntBASIC4.05□□□□□ -1.76
SCAPERQ9BY12 NDUFB4P9-201ENST00000511646 388 ntBASIC4.05□□□□□ -1.76
SCAPERQ9BY12 AC107294.3-201ENST00000609211 526 ntBASIC4.05□□□□□ -1.76
SCAPERQ9BY12 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCAPERQ9BY12 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.05□□□□□ -1.76
SCAPERQ9BY12 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SCAPERQ9BY12 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SCAPERQ9BY12 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SCAPERQ9BY12 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCAPERQ9BY12 SNORA70E-201ENST00000384492 135 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 RN7SKP223-201ENST00000410582 62 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AC005189.1-201ENST00000431286 310 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AL603825.1-201ENST00000438481 80 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.04□□□□□ -1.76
SCAPERQ9BY12 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.04□□□□□ -1.76
SCAPERQ9BY12 ZNF861P-201ENST00000588126 639 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AC007621.1-201ENST00000604544 437 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AC099778.2-201ENST00000610904 211 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
SCAPERQ9BY12 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.04□□□□□ -1.76
SCAPERQ9BY12 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AL590639.1-201ENST00000456484 337 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 RN7SKP43-201ENST00000516173 320 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.04□□□□□ -1.76
SCAPERQ9BY12 HPRT1P3-201ENST00000539521 576 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 OR4H12P-201ENST00000556269 907 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AC103710.3-201ENST00000608157 948 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AC004972.1-201ENST00000623934 2209 ntBASIC4.04□□□□□ -1.76
SCAPERQ9BY12 AC008264.2-201ENST00000610193 3731 ntBASIC4.03□□□□□ -1.76
SCAPERQ9BY12 AC090229.1-201ENST00000590983 1609 ntBASIC4.03□□□□□ -1.76
SCAPERQ9BY12 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.03□□□□□ -1.76
SCAPERQ9BY12 AC009487.2-201ENST00000420969 6821 ntBASIC4.03□□□□□ -1.76
SCAPERQ9BY12 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SCAPERQ9BY12 RNU6-618P-201ENST00000363518 112 ntBASIC4.03□□□□□ -1.76
SCAPERQ9BY12 RNU6-304P-201ENST00000364855 107 ntBASIC4.03□□□□□ -1.76
SCAPERQ9BY12 RPL21P3-201ENST00000395517 478 ntBASIC4.03□□□□□ -1.76
SCAPERQ9BY12 HMGB3P12-201ENST00000438745 556 ntBASIC4.03□□□□□ -1.76
SCAPERQ9BY12 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.03□□□□□ -1.76
SCAPERQ9BY12 AC146507.2-201ENST00000460608 476 ntBASIC4.03□□□□□ -1.76
SCAPERQ9BY12 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.03□□□□□ -1.76
SCAPERQ9BY12 SRIP1-201ENST00000489235 288 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms