Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SNRPEP10-201ENST00000420249 274 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 RPS11P1-201ENST00000451072 473 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 MEMO1P4-201ENST00000453590 386 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AL356010.1-201ENST00000456364 102 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 RN7SL432P-201ENST00000484057 298 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 RPS21P4-201ENST00000487122 248 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 RN7SL30P-201ENST00000488416 306 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 NIFKP7-201ENST00000503365 834 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 HSPD1P15-201ENST00000505573 1122 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AP001922.4-201ENST00000526967 290 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 SNRPGP15-201ENST00000600149 222 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AC004067.1-201ENST00000608733 700 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 RNA5SP439-201ENST00000617595 124 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AC110801.1-201ENST00000623590 212 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 AL645937.1-201ENST00000641739 1652 ntBASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
TRAIPQ9BWF2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
TRAIPQ9BWF2 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
TRAIPQ9BWF2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
TRAIPQ9BWF2 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 LDHAL6CP-202ENST00000550738 3224 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 EXOC5P1-201ENST00000510543 1969 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 Y_RNA.381-201ENST00000365666 102 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 SNORA69-201ENST00000383895 132 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 GJA6P-201ENST00000415117 1042 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 EI24P1-201ENST00000416584 867 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 RWDD4P2-201ENST00000426392 563 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 AC090774.1-201ENST00000435925 246 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 AL138799.3-201ENST00000438968 350 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 RNU7-182P-201ENST00000459009 62 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 GLUD1P3-202ENST00000508551 200 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 KLHL2P1-201ENST00000508691 521 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 AC055839.1-201ENST00000634467 498 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 SAMMSON-227ENST00000642114 1199 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 AC116667.1-201ENST00000604855 2072 ntBASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRAIPQ9BWF2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 AC092326.2-201ENST00000624772 1561 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 RNU5E-4P-201ENST00000364931 120 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 Y_RNA.367-201ENST00000365544 101 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 RNU5E-6P-201ENST00000365574 115 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 MIR454-201ENST00000390180 115 ntBASIC6.07□□□□□ -1.44
TRAIPQ9BWF2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms