Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 AC015802.5-201ENST00000607478 399 ntBASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 AC018755.4-201ENST00000619715 454 ntBASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 AL353743.1-202ENST00000431724 1695 ntBASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 FAM35CP-201ENST00000554755 2470 ntBASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RHOXF2Q9BQY4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 RN7SKP280-201ENST00000364196 304 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 SNORA51.4-201ENST00000364993 124 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 CD24P4-201ENST00000382840 243 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 DHFRP5-201ENST00000406944 564 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 RN7SL132P-201ENST00000478131 296 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 MTCO1P31-201ENST00000506355 492 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 MTND4LP31-201ENST00000514859 294 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 RN7SL703P-201ENST00000578485 302 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC090312.2-201ENST00000582687 378 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC008687.2-201ENST00000597865 520 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC096947.1-201ENST00000603233 470 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC103881.1-201ENST00000603476 538 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC113368.1-201ENST00000603736 382 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC022387.2-201ENST00000604050 448 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC135178.6-201ENST00000605314 398 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC090912.3-201ENST00000609775 533 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 MAPK10-322ENST00000641485 4530 ntBASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.37□□□□□ -1.87
RHOXF2Q9BQY4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AL512646.1-201ENST00000269395 1077 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 RPL23AP57-201ENST00000332361 466 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 RPS3AP26-201ENST00000398259 784 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 BMS1P22-201ENST00000414726 313 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 MTND2P21-201ENST00000436242 1042 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 GAPDHP39-201ENST00000481866 979 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 RNA5SP385-201ENST00000515947 110 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AP003385.6-201ENST00000531603 374 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AC055876.1-202ENST00000567053 138 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 MIR4506-201ENST00000584693 77 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AC022916.3-201ENST00000592961 742 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AC018618.2-201ENST00000604770 446 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AC095031.1-201ENST00000623685 672 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 AL161912.2-201ENST00000565707 3007 ntBASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.36□□□□□ -1.87
RHOXF2Q9BQY4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 SFR1P1-201ENST00000403720 688 ntBASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 MTCO3P12-201ENST00000416718 547 ntBASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 AL035423.1-201ENST00000420331 213 ntBASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 AC233728.2-201ENST00000425348 757 ntBASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 RPL7P2-201ENST00000427639 268 ntBASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 MTATP6P4-201ENST00000427725 675 ntBASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 SNRPEP4-201ENST00000435815 279 ntBASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 RPS29P7-201ENST00000439662 171 ntBASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 XKRYP6-201ENST00000440468 1116 ntBASIC3.35□□□□□ -1.87
RHOXF2Q9BQY4 XKRYP3-201ENST00000442113 1116 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms