Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.06□□□□□ -1.76
PKP4Q99569 CBX3P5-201ENST00000552017 521 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.06□□□□□ -1.76
PKP4Q99569 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.06□□□□□ -1.76
PKP4Q99569 AC022655.2-201ENST00000577280 318 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AC006270.2-201ENST00000578523 652 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 BPTFP1-201ENST00000579209 492 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.06□□□□□ -1.76
PKP4Q99569 AF131215.7-201ENST00000602443 707 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AC009220.3-201ENST00000604318 586 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PKP4Q99569 AL158063.1-201ENST00000615349 536 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AL445567.2-201ENST00000618935 498 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 MIR6758-201ENST00000620653 63 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PKP4Q99569 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PKP4Q99569 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.06□□□□□ -1.76
PKP4Q99569 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.06□□□□□ -1.76
PKP4Q99569 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PKP4Q99569 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PKP4Q99569 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.06□□□□□ -1.76
PKP4Q99569 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PKP4Q99569 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.05□□□□□ -1.76
PKP4Q99569 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP4Q99569 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 AL391994.1-201ENST00000254724 282 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 RNU6-931P-201ENST00000363850 107 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 RNA5SP167-201ENST00000365461 116 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 Y_RNA.560-201ENST00000384689 102 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 MIR513A2-201ENST00000385249 127 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP4Q99569 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP4Q99569 OR51A3P-201ENST00000413596 924 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP4Q99569 RPL23AP38-201ENST00000423801 469 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP4Q99569 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 NUTF2P3-201ENST00000448540 384 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 TPT1P12-201ENST00000448968 492 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 MTND1P27-201ENST00000451117 902 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 HMGN3P1-201ENST00000453847 193 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 RN7SL585P-201ENST00000470538 280 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AC026979.1-201ENST00000492525 396 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP4Q99569 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP4Q99569 AC005178.1-201ENST00000508392 440 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AC093824.1-201ENST00000508796 343 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP4Q99569 AC079395.1-201ENST00000510981 262 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 AC109445.1-201ENST00000512356 383 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP4Q99569 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP4Q99569 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP4Q99569 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP4Q99569 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 IFITM8P-201ENST00000522529 394 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP4Q99569 AP003730.1-201ENST00000524605 285 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.05□□□□□ -1.76
PKP4Q99569 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP4Q99569 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP4Q99569 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.05□□□□□ -1.76
PKP4Q99569 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.05□□□□□ -1.76
PKP4Q99569 MIR3939-201ENST00000582614 106 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AL592221.1-201ENST00000605266 382 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AC103591.3-201ENST00000608684 209 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AC005962.2-201ENST00000611427 652 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AC023158.2-201ENST00000614876 543 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 AC006338.2-201ENST00000616864 791 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 MIR7702-201ENST00000621931 59 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
PKP4Q99569 AF001550.2-201ENST00000636643 217 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 FAM91A3P-201ENST00000456826 2544 ntBASIC4.05□□□□□ -1.76
PKP4Q99569 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.05□□□□□ -1.76
PKP4Q99569 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP4Q99569 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKP4Q99569 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKP4Q99569 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PKP4Q99569 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.04□□□□□ -1.76
PKP4Q99569 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.04□□□□□ -1.76
PKP4Q99569 RPL32P3-201ENST00000359025 275 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.04□□□□□ -1.76
PKP4Q99569 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PKP4Q99569 EIF5P1-201ENST00000400019 1231 ntBASIC4.04□□□□□ -1.76
PKP4Q99569 RNA5SP80-201ENST00000410475 111 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms