Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDK5RAP1Q96SZ6 DCAF13P1-201ENST00000495256 1330 ntBASIC4.97□□□□□ -1.61
CDK5RAP1Q96SZ6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP1Q96SZ6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.97□□□□□ -1.61
CDK5RAP1Q96SZ6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CDK5RAP1Q96SZ6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
CDK5RAP1Q96SZ6 AC125257.1-201ENST00000560400 2930 ntBASIC4.96□□□□□ -1.61
CDK5RAP1Q96SZ6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.96□□□□□ -1.61
CDK5RAP1Q96SZ6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CDK5RAP1Q96SZ6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.96□□□□□ -1.61
CDK5RAP1Q96SZ6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.96□□□□□ -1.61
CDK5RAP1Q96SZ6 NSRP1P1-201ENST00000444067 1693 ntBASIC4.96□□□□□ -1.61
CDK5RAP1Q96SZ6 AL359922.3-201ENST00000624779 1670 ntBASIC4.96□□□□□ -1.61
CDK5RAP1Q96SZ6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC079741.1-201ENST00000321498 212 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 Y_RNA.381-201ENST00000365666 102 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC119751.6-201ENST00000416712 186 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 TMBIM7P-201ENST00000418074 855 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 PGBD4P3-201ENST00000440731 581 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 MRPL48P1-201ENST00000445390 636 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 H2AFZP5-201ENST00000446960 382 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC079448.1-201ENST00000449377 373 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC243772.1-201ENST00000451620 410 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC233279.1-201ENST00000455300 423 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 snoU109.1-201ENST00000459339 135 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC010326.1-201ENST00000462726 602 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC091868.1-201ENST00000508746 304 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 FGF7P4-201ENST00000509595 295 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AP005597.4-201ENST00000526762 229 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC005868.1-201ENST00000536421 331 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AP006289.1-201ENST00000538089 277 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC013553.2-201ENST00000604244 589 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC103710.1-201ENST00000610003 901 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC021106.3-201ENST00000623925 531 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AC073869.10-201ENST00000642016 354 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 AL445437.1-201ENST00000623157 3087 ntBASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CDK5RAP1Q96SZ6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 MTND5P3-201ENST00000438536 1800 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 UGT2B26P-201ENST00000508672 1613 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-254P-201ENST00000363377 107 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 RNY4P34-201ENST00000364779 95 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 MIR606-201ENST00000384851 96 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 U8.14-201ENST00000390843 143 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 CYB5AP4-201ENST00000396692 399 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 U3.35-201ENST00000408405 208 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 HMGB1P11-201ENST00000413899 637 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AL645608.4-201ENST00000423619 154 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 DYNLL1P7-201ENST00000429273 258 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 MTND6P18-201ENST00000439477 513 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 ARPC3P5-201ENST00000448802 534 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 ACTR3P3-201ENST00000480448 893 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC026412.2-201ENST00000512270 1075 ntBASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP1Q96SZ6 Y_RNA.693-201ENST00000516641 110 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms