Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.34□□□□□ -1.71
IFT140Q96RY7 AC007423.1-201ENST00000605009 627 ntBASIC4.34□□□□□ -1.71
IFT140Q96RY7 AC092184.1-201ENST00000625042 715 ntBASIC4.34□□□□□ -1.71
IFT140Q96RY7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
IFT140Q96RY7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
IFT140Q96RY7 XPOTP1-201ENST00000443317 2398 ntBASIC4.33□□□□□ -1.72
IFT140Q96RY7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
IFT140Q96RY7 RPLP0P7-201ENST00000416050 667 ntBASIC4.33□□□□□ -1.72
IFT140Q96RY7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.33□□□□□ -1.72
IFT140Q96RY7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.33□□□□□ -1.72
IFT140Q96RY7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.33□□□□□ -1.72
IFT140Q96RY7 DLEU2_6.1-201ENST00000610536 112 ntBASIC4.33□□□□□ -1.72
IFT140Q96RY7 AC123768.4-201ENST00000616244 701 ntBASIC4.33□□□□□ -1.72
IFT140Q96RY7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
IFT140Q96RY7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
IFT140Q96RY7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.32□□□□□ -1.72
IFT140Q96RY7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
IFT140Q96RY7 U3.6-201ENST00000363622 211 ntBASIC4.32□□□□□ -1.72
IFT140Q96RY7 AL138878.1-201ENST00000405131 347 ntBASIC4.32□□□□□ -1.72
IFT140Q96RY7 BTF3P7-201ENST00000407097 488 ntBASIC4.32□□□□□ -1.72
IFT140Q96RY7 YPEL5P1-201ENST00000419731 367 ntBASIC4.32□□□□□ -1.72
IFT140Q96RY7 RPL30P9-201ENST00000465586 330 ntBASIC4.32□□□□□ -1.72
IFT140Q96RY7 RN7SL636P-201ENST00000497504 294 ntBASIC4.32□□□□□ -1.72
IFT140Q96RY7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
IFT140Q96RY7 AP000867.2-201ENST00000532468 320 ntBASIC4.32□□□□□ -1.72
IFT140Q96RY7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.32□□□□□ -1.72
IFT140Q96RY7 PDCD5P1-201ENST00000543528 309 ntBASIC4.32□□□□□ -1.72
IFT140Q96RY7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.32□□□□□ -1.72
IFT140Q96RY7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.32□□□□□ -1.72
IFT140Q96RY7 AC103810.6-201ENST00000606708 136 ntBASIC4.32□□□□□ -1.72
IFT140Q96RY7 AC090115.4-201ENST00000609970 188 ntBASIC4.32□□□□□ -1.72
IFT140Q96RY7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
IFT140Q96RY7 AC016717.2-201ENST00000609089 5141 ntBASIC4.32□□□□□ -1.72
IFT140Q96RY7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
IFT140Q96RY7 NEAT1-202ENST00000501122 22743 ntBASIC4.31□□□□□ -1.72
IFT140Q96RY7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
IFT140Q96RY7 AC004987.3-201ENST00000413879 771 ntBASIC4.31□□□□□ -1.72
IFT140Q96RY7 AC245054.2-201ENST00000415639 319 ntBASIC4.31□□□□□ -1.72
IFT140Q96RY7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.31□□□□□ -1.72
IFT140Q96RY7 AC008280.2-201ENST00000455473 307 ntBASIC4.31□□□□□ -1.72
IFT140Q96RY7 SEPT7P6-201ENST00000469999 1143 ntBASIC4.31□□□□□ -1.72
IFT140Q96RY7 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
IFT140Q96RY7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
IFT140Q96RY7 AADACP1-206ENST00000561502 1193 ntBASIC4.31□□□□□ -1.72
IFT140Q96RY7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
IFT140Q96RY7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
IFT140Q96RY7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.31□□□□□ -1.72
IFT140Q96RY7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
IFT140Q96RY7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
IFT140Q96RY7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
IFT140Q96RY7 RNU1-73P-201ENST00000383971 164 ntBASIC4.3□□□□□ -1.72
IFT140Q96RY7 PTP4A1P5-201ENST00000420305 455 ntBASIC4.3□□□□□ -1.72
IFT140Q96RY7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.3□□□□□ -1.72
IFT140Q96RY7 AC096638.1-201ENST00000444678 216 ntBASIC4.3□□□□□ -1.72
IFT140Q96RY7 VN1R48P-201ENST00000448149 1036 ntBASIC4.3□□□□□ -1.72
IFT140Q96RY7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.3□□□□□ -1.72
IFT140Q96RY7 AC106872.2-201ENST00000494303 480 ntBASIC4.3□□□□□ -1.72
IFT140Q96RY7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
IFT140Q96RY7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.3□□□□□ -1.72
IFT140Q96RY7 MIR4635-201ENST00000583759 79 ntBASIC4.3□□□□□ -1.72
IFT140Q96RY7 AL139286.1-201ENST00000604465 483 ntBASIC4.3□□□□□ -1.72
IFT140Q96RY7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.3□□□□□ -1.72
IFT140Q96RY7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.3□□□□□ -1.72
IFT140Q96RY7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
IFT140Q96RY7 AC107081.3-201ENST00000612715 2034 ntBASIC4.3□□□□□ -1.72
IFT140Q96RY7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.3□□□□□ -1.72
IFT140Q96RY7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
IFT140Q96RY7 NANOGP5-201ENST00000424456 877 ntBASIC4.3□□□□□ -1.72
IFT140Q96RY7 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
IFT140Q96RY7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.3□□□□□ -1.72
IFT140Q96RY7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.3□□□□□ -1.72
IFT140Q96RY7 MIR4644-201ENST00000579929 84 ntBASIC4.3□□□□□ -1.72
IFT140Q96RY7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
IFT140Q96RY7 NF1P10-201ENST00000613227 742 ntBASIC4.3□□□□□ -1.72
IFT140Q96RY7 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.29□□□□□ -1.72
IFT140Q96RY7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.29□□□□□ -1.72
IFT140Q96RY7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
IFT140Q96RY7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC4.29□□□□□ -1.72
IFT140Q96RY7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
IFT140Q96RY7 MIR3074-201ENST00000384885 81 ntBASIC4.29□□□□□ -1.72
IFT140Q96RY7 AL359511.1-201ENST00000402970 211 ntBASIC4.29□□□□□ -1.72
IFT140Q96RY7 AL512430.2-201ENST00000406786 339 ntBASIC4.29□□□□□ -1.72
IFT140Q96RY7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.29□□□□□ -1.72
IFT140Q96RY7 AC105402.2-201ENST00000438503 358 ntBASIC4.29□□□□□ -1.72
IFT140Q96RY7 AC008716.1-201ENST00000511084 513 ntBASIC4.29□□□□□ -1.72
IFT140Q96RY7 AC034244.2-201ENST00000514668 858 ntBASIC4.29□□□□□ -1.72
IFT140Q96RY7 RANP3-201ENST00000530970 276 ntBASIC4.29□□□□□ -1.72
IFT140Q96RY7 AC110741.2-201ENST00000605278 268 ntBASIC4.29□□□□□ -1.72
IFT140Q96RY7 AC016727.1-205ENST00000605437 569 ntBASIC4.29□□□□□ -1.72
IFT140Q96RY7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.29□□□□□ -1.72
IFT140Q96RY7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.28□□□□□ -1.72
IFT140Q96RY7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
IFT140Q96RY7 MIR423-201ENST00000362201 94 ntBASIC4.28□□□□□ -1.72
IFT140Q96RY7 SNORD114-30-201ENST00000364448 72 ntBASIC4.28□□□□□ -1.72
IFT140Q96RY7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.28□□□□□ -1.72
IFT140Q96RY7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
IFT140Q96RY7 OR11H5P-201ENST00000554039 926 ntBASIC4.28□□□□□ -1.72
IFT140Q96RY7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC4.28□□□□□ -1.72
IFT140Q96RY7 MTND4P10-201ENST00000446199 1363 ntBASIC4.27□□□□□ -1.73
IFT140Q96RY7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms