Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC134050.1-201ENST00000495088 933 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 CEACAMP10-202ENST00000495431 496 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AC004062.1-201ENST00000509926 645 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 FTH1P21-201ENST00000512179 511 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 SNORA48.10-201ENST00000516965 160 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AC027309.2-201ENST00000520566 192 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 EEF1A1P37-201ENST00000522748 715 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 OR10V3P-201ENST00000525712 725 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AL590392.1-201ENST00000604960 446 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AC083809.1-201ENST00000615051 472 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 MIR6758-201ENST00000620653 63 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AC073530.2-201ENST00000623987 261 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AC097655.1-201ENST00000635075 318 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 NUP58P1-201ENST00000502546 1738 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AL672296.1-201ENST00000427780 2158 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 AC244517.1-201ENST00000606030 2086 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.77□□□□□ -1.81
PDLIM5Q96HC4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AP001148.1-201ENST00000624124 2359 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 RNU1-18P-201ENST00000363062 164 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 RNU1-13P-201ENST00000384499 162 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 Z98941.1-201ENST00000407764 100 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 KRR1P1-201ENST00000419430 803 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 RPL21P109-201ENST00000422213 475 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AL035246.1-201ENST00000433554 1255 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 HSFY6P-201ENST00000445573 403 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 EXTL2P1-201ENST00000446218 416 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 HMGB1P15-201ENST00000453854 435 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 CFTRP1-201ENST00000456646 183 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 SNORD11.1-201ENST00000459482 85 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AC078785.3-201ENST00000476607 425 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 PPIAP15-201ENST00000479662 484 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 RPS4XP15-201ENST00000489210 795 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 HMGB1P22-201ENST00000505315 124 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 RN7SKP287-201ENST00000516546 266 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 RN7SKP209-201ENST00000516888 304 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 DEFB130C-202ENST00000530001 230 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AC090502.2-201ENST00000549267 280 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 MIR5708-201ENST00000579723 85 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AL357094.1-201ENST00000603845 844 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AC008083.4-201ENST00000615076 444 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 AC006386.1-201ENST00000619436 415 ntBASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM5Q96HC4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 RPL32P3-201ENST00000359025 275 ntBASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 SUGT1P1-201ENST00000379514 476 ntBASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 U1.1-201ENST00000384101 164 ntBASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 ATP5F1P4-201ENST00000397288 746 ntBASIC3.75□□□□□ -1.81
PDLIM5Q96HC4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms