Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HPS3Q969F9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HPS3Q969F9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HPS3Q969F9 AC097714.1-201ENST00000511272 1647 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.88□□□□□ -1.63
HPS3Q969F9 RNA5SP307-201ENST00000362863 116 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.88□□□□□ -1.63
HPS3Q969F9 RPL31P1-201ENST00000398116 372 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HPS3Q969F9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.88□□□□□ -1.63
HPS3Q969F9 MTCO2P34-201ENST00000421994 607 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 CENPIP1-201ENST00000425713 902 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AC068287.1-201ENST00000430283 295 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 RPL23AP25-201ENST00000430973 463 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.88□□□□□ -1.63
HPS3Q969F9 RPL37P21-201ENST00000435890 276 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 MUPP-201ENST00000438111 566 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.88□□□□□ -1.63
HPS3Q969F9 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.88□□□□□ -1.63
HPS3Q969F9 AC073587.1-201ENST00000447093 876 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.88□□□□□ -1.63
HPS3Q969F9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HPS3Q969F9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.88□□□□□ -1.63
HPS3Q969F9 DHFRP3-201ENST00000455595 559 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.88□□□□□ -1.63
HPS3Q969F9 RPL37P6-202ENST00000464216 403 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 RN7SL459P-201ENST00000481078 302 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.88□□□□□ -1.63
HPS3Q969F9 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.88□□□□□ -1.63
HPS3Q969F9 AC022447.3-201ENST00000506865 495 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 RNA5SP497-201ENST00000516081 97 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AC090151.1-201ENST00000520784 730 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 COX6CP8-201ENST00000522620 226 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AC013828.2-201ENST00000532487 235 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HPS3Q969F9 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.88□□□□□ -1.63
HPS3Q969F9 OR6C7P-201ENST00000547875 934 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AC091489.2-201ENST00000566263 604 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.88□□□□□ -1.63
HPS3Q969F9 AC146944.4-201ENST00000602697 718 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.88□□□□□ -1.63
HPS3Q969F9 AC115621.1-201ENST00000604653 858 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AL354984.3-201ENST00000604803 325 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AC087752.4-201ENST00000605911 462 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AC090116.1-201ENST00000615679 446 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AC004009.2-201ENST00000623016 728 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.88□□□□□ -1.63
HPS3Q969F9 OR11H5P-202ENST00000641612 1325 ntBASIC4.88□□□□□ -1.63
HPS3Q969F9 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HPS3Q969F9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.88□□□□□ -1.63
HPS3Q969F9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HPS3Q969F9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HPS3Q969F9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HPS3Q969F9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HPS3Q969F9 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HPS3Q969F9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
HPS3Q969F9 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HPS3Q969F9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.87□□□□□ -1.63
HPS3Q969F9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC009951.1-201ENST00000623674 2614 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AL138880.1-201ENST00000405824 642 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 HDGFP1-201ENST00000405943 252 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC009480.2-201ENST00000422916 432 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS3Q969F9 MTCO1P19-201ENST00000443487 500 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS3Q969F9 DNAJC19P1-201ENST00000455312 319 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 BX322784.1-201ENST00000455793 1077 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 SUMO2P2-201ENST00000456482 255 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC053481.1-201ENST00000467217 306 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 RPL35AP15-201ENST00000468042 339 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 RN7SL41P-201ENST00000476144 297 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 AC068587.1-201ENST00000483613 781 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 AC004069.2-201ENST00000505438 1114 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC005798.1-201ENST00000513715 387 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 RN7SKP92-201ENST00000517266 244 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AP000827.1-201ENST00000527814 258 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 OR5AP1P-201ENST00000529730 940 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.87□□□□□ -1.63
HPS3Q969F9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AC012414.6-201ENST00000568241 401 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 AC068790.2-201ENST00000602601 557 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 AL139286.2-201ENST00000606838 396 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HPS3Q969F9 AL445264.1-201ENST00000621719 171 ntBASIC4.87□□□□□ -1.63
HPS3Q969F9 AL356121.2-201ENST00000624715 780 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms