Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.26□□□□□ -1.73
TOPBP1Q92547 PRELID3BP7-201ENST00000503606 469 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 IGLVIV-53-201ENST00000520107 367 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.26□□□□□ -1.73
TOPBP1Q92547 AC068313.1-201ENST00000604028 1008 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 AC026634.1-201ENST00000634369 198 ntBASIC4.26□□□□□ -1.73
TOPBP1Q92547 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TOPBP1Q92547 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TOPBP1Q92547 AC080125.1-201ENST00000414888 684 ntBASIC4.25□□□□□ -1.73
TOPBP1Q92547 HMGN2P23-201ENST00000456759 269 ntBASIC4.25□□□□□ -1.73
TOPBP1Q92547 AC016687.1-201ENST00000482574 353 ntBASIC4.25□□□□□ -1.73
TOPBP1Q92547 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.25□□□□□ -1.73
TOPBP1Q92547 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TOPBP1Q92547 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TOPBP1Q92547 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TOPBP1Q92547 RPS12P5-201ENST00000423449 371 ntBASIC4.24□□□□□ -1.73
TOPBP1Q92547 VDAC1P3-201ENST00000434069 851 ntBASIC4.24□□□□□ -1.73
TOPBP1Q92547 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.24□□□□□ -1.73
TOPBP1Q92547 RN7SL442P-201ENST00000473804 320 ntBASIC4.24□□□□□ -1.73
TOPBP1Q92547 SNORA9.3-201ENST00000516383 129 ntBASIC4.24□□□□□ -1.73
TOPBP1Q92547 AC015911.5-201ENST00000587076 451 ntBASIC4.24□□□□□ -1.73
TOPBP1Q92547 AL020991.1-201ENST00000612314 373 ntBASIC4.24□□□□□ -1.73
TOPBP1Q92547 AC123768.4-201ENST00000616244 701 ntBASIC4.24□□□□□ -1.73
TOPBP1Q92547 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TOPBP1Q92547 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TOPBP1Q92547 AL353743.4-201ENST00000422653 1547 ntBASIC4.24□□□□□ -1.73
TOPBP1Q92547 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TOPBP1Q92547 SPATA2P1-201ENST00000431223 2055 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 AC138915.3-201ENST00000562908 1389 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
TOPBP1Q92547 OR11H5P-202ENST00000641612 1325 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 AC087565.3-202ENST00000642085 1603 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TOPBP1Q92547 RNU1-73P-201ENST00000383971 164 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.23□□□□□ -1.73
TOPBP1Q92547 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TOPBP1Q92547 RPL36AP51-201ENST00000487216 318 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 OR4G11P-201ENST00000492842 939 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 SUMO2P4-201ENST00000504193 276 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 MTND4P2-201ENST00000507767 1203 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.23□□□□□ -1.73
TOPBP1Q92547 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.23□□□□□ -1.73
TOPBP1Q92547 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.23□□□□□ -1.73
TOPBP1Q92547 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC4.23□□□□□ -1.73
TOPBP1Q92547 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.23□□□□□ -1.73
TOPBP1Q92547 AC004696.1-201ENST00000614345 607 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
TOPBP1Q92547 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TOPBP1Q92547 MTND5P6-201ENST00000422338 1798 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 SYT14P1-202ENST00000600441 1448 ntBASIC4.23□□□□□ -1.73
TOPBP1Q92547 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TOPBP1Q92547 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.22□□□□□ -1.73
TOPBP1Q92547 AL031985.3-201ENST00000565390 2449 ntBASIC4.22□□□□□ -1.73
TOPBP1Q92547 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TOPBP1Q92547 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TOPBP1Q92547 AL024474.1-201ENST00000404655 591 ntBASIC4.22□□□□□ -1.73
TOPBP1Q92547 AL445213.1-201ENST00000412589 747 ntBASIC4.22□□□□□ -1.73
TOPBP1Q92547 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.22□□□□□ -1.73
TOPBP1Q92547 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TOPBP1Q92547 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.22□□□□□ -1.73
TOPBP1Q92547 OR8L1P-201ENST00000534005 955 ntBASIC4.22□□□□□ -1.73
TOPBP1Q92547 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.22□□□□□ -1.73
TOPBP1Q92547 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.22□□□□□ -1.73
TOPBP1Q92547 CR381653.2-201ENST00000624041 768 ntBASIC4.22□□□□□ -1.73
TOPBP1Q92547 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TOPBP1Q92547 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC4.22□□□□□ -1.73
TOPBP1Q92547 XPOTP1-201ENST00000443317 2398 ntBASIC4.21□□□□□ -1.73
TOPBP1Q92547 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
TOPBP1Q92547 HMGB3P23-201ENST00000414981 585 ntBASIC4.21□□□□□ -1.73
TOPBP1Q92547 AP004217.1-201ENST00000480579 346 ntBASIC4.21□□□□□ -1.73
TOPBP1Q92547 RNA5SP458-201ENST00000516188 119 ntBASIC4.21□□□□□ -1.73
TOPBP1Q92547 RNU6-964P-201ENST00000516524 69 ntBASIC4.21□□□□□ -1.73
TOPBP1Q92547 TTC39DP-201ENST00000416781 1688 ntBASIC4.21□□□□□ -1.73
TOPBP1Q92547 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.21□□□□□ -1.74
TOPBP1Q92547 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.21□□□□□ -1.74
TOPBP1Q92547 AC007064.1-201ENST00000412238 351 ntBASIC4.21□□□□□ -1.74
TOPBP1Q92547 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.21□□□□□ -1.74
TOPBP1Q92547 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.21□□□□□ -1.74
TOPBP1Q92547 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TOPBP1Q92547 CKS1BP1-201ENST00000555221 240 ntBASIC4.21□□□□□ -1.74
TOPBP1Q92547 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.21□□□□□ -1.74
TOPBP1Q92547 LINC00901.1-201ENST00000617252 152 ntBASIC4.21□□□□□ -1.74
TOPBP1Q92547 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.21□□□□□ -1.74
TOPBP1Q92547 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.21□□□□□ -1.74
TOPBP1Q92547 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TOPBP1Q92547 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TOPBP1Q92547 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TOPBP1Q92547 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TOPBP1Q92547 AC069218.2-201ENST00000411665 344 ntBASIC4.2□□□□□ -1.74
TOPBP1Q92547 ISCA1P6-201ENST00000427740 390 ntBASIC4.2□□□□□ -1.74
TOPBP1Q92547 AC011816.1-201ENST00000441346 546 ntBASIC4.2□□□□□ -1.74
TOPBP1Q92547 Z99127.2-201ENST00000441426 334 ntBASIC4.2□□□□□ -1.74
TOPBP1Q92547 AL592437.1-201ENST00000443781 492 ntBASIC4.2□□□□□ -1.74
TOPBP1Q92547 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.2□□□□□ -1.74
TOPBP1Q92547 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.2□□□□□ -1.74
TOPBP1Q92547 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.2□□□□□ -1.74
TOPBP1Q92547 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
TOPBP1Q92547 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TOPBP1Q92547 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TOPBP1Q92547 AC093831.2-201ENST00000624393 3427 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms