Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RN7SL30P-201ENST00000488416 306 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 COX7A2P2-201ENST00000505291 250 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 HMGB1P19-201ENST00000517578 577 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AP000859.1-201ENST00000525536 307 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC005341.1-201ENST00000571086 708 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC024619.4-201ENST00000580924 316 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC023043.2-201ENST00000589678 1026 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AC073539.2-201ENST00000597113 165 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AL442128.2-201ENST00000620246 1824 ntBASIC6.31□□□□□ -1.4
RNF135Q8IUD6 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
RNF135Q8IUD6 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 SNORA43.1-201ENST00000364863 140 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 RNU6-601P-201ENST00000384540 107 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AL662874.1-201ENST00000426065 230 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC092651.1-201ENST00000426110 312 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 FABP7P2-201ENST00000429946 379 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 FTH1P2-201ENST00000466086 412 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC006967.1-201ENST00000467608 589 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 RN7SL269P-201ENST00000467795 305 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 CR383656.1-201ENST00000484916 377 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC008953.1-201ENST00000497334 318 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 RNA5SP400-201ENST00000517155 111 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 NRBF2P4-201ENST00000520874 850 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AL133271.1-201ENST00000538229 291 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 MIR3189-201ENST00000578735 73 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC138761.3-201ENST00000579993 334 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 RNU4ATAC-201ENST00000580972 127 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 Mico1.1-201ENST00000611698 204 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC012409.4-201ENST00000612923 249 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 U1.25-201ENST00000614085 162 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC123768.4-201ENST00000616244 701 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC098657.3-201ENST00000620434 263 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AL357559.1-201ENST00000622228 274 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AL353662.3-201ENST00000625131 237 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC007159.1-201ENST00000566529 4706 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 GNL2P1-201ENST00000451274 2190 ntBASIC6.3□□□□□ -1.4
RNF135Q8IUD6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF135Q8IUD6 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AL049641.1-201ENST00000441055 1948 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 RNU6-1287P-201ENST00000362914 107 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 RNA5SP375-201ENST00000362975 119 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 Y_RNA.307-201ENST00000365022 117 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 RNU5E-6P-201ENST00000365574 115 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 RNU4-2-201ENST00000365668 141 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms